Pseudomonas sp. HPB0071, HMPREF1487_05139
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. HPB0071
GCF_000478505.2|latest |
| Locus Tag |
HMPREF1487_05139
|
| NCBI Locus Tag | HMPREF1487_RS04210 |
| Name |
|
| Replicon | scaffold_1 |
| Genomic location | 831885 - 832652 (- strand) |
Cross-References
| RefSeq | WP_010795352.1 |
| GI | 498494616 |
| NCBI Locus Tag | HMPREF1487_RS04210 |
| NCBI Old Locus Tag | HMPREF1487_05139 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
general L-amino acid transport ATP-binding protein AapP
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.77 |
| Kyte-Doolittle Hydrophobicity Value | -0.264 |
| Molecular Weight (kDa) | 28.9 |
| Isoelectric Point (pI) | 7.22 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001274 (527 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: HMPREF1487_05139
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 5 [Source:HGNC Symbol;Acc:HGNC:46]
E-value:
3.6e-22
Percent Identity:
32.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 5 [Source:HGNC Symbol;Acc:HGNC:46]
E-value:
3.6e-22
Percent Identity:
32.7
|
References
No references are associated with this feature.