Pseudomonas sp. GM41(2012), PMI27_003922

Gene Feature Overview

Strain	Pseudomonas sp. GM41(2012) GCF_000282315.2|latest
Locus Tag	PMI27_003922
NCBI Locus Tag	PMI27_RS07755
Name
Replicon	ctg4
Genomic location	110186 - 111247 (+ strand)

Cross-References

RefSeq	WP_008153950.1
GI	495429254
INSDC	EUB72000.1
NCBI Locus Tag	PMI27_RS07755
NCBI Old Locus Tag	PMI27_003922
UniParc	UPI0002700976
UniProtKB Acc	W6UWZ8
UniProtKB ID	W6UWZ8_9PSED
UniRef100	UniRef100_W6UWZ8
UniRef50	UniRef50_Q6D1H8
UniRef90	UniRef90_E2XXJ0

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA polymerase IV
Synonyms
Evidence for Translation
Charge (pH 7)	2.99
Kyte-Doolittle Hydrophobicity Value	-0.266
Molecular Weight (kDa)	39.3
Isoelectric Point (pI)	7.87

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000889 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMI27_003922 Search term: DNA polymerase IV

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000258428 REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060] E-value: 1.5e-39 Percent Identity: 29.8
Ensembl 110, assembly GRCh38.p14	ENSP00000377091 REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060] E-value: 1.5e-39 Percent Identity: 29.9

References