Pseudomonas taiwanensis DSM 21245, H620_RS0120280
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taiwanensis DSM 21245 H620DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCAACATCCTTGCCCTTAACGCGGCAATCCAGGCATCGCTGGCGGGCGAAGCCGGTCGCGGCTTTGCCGTGGTCGCCGACGAGGTGCAGCGCCTGGCG GAGCGCTCCTCCTCGGCAACGCGGCAGATCGAGGCCTTGGTACGCACCATTCAGGCCGATACCAACGAAGCGGTCATCTCGATGGAACAGACCACCGCCG AAGTGGTGCGCGGCGCGCGCCTGGCGCAGGATGCCGGGGTAGCACTGGCTGAGATCGAAGGCGTGTCGCAGAACCTTGCCGAGCTGATCCACAGCATTTC CGATGCCGCCCAGTTGCAGACGTCGTCGGCTGGTCAGATTTCCCACACCATGGCGGTGATCCAGCAAATTACCGCGCAGACCTCCGCAGGCTCTGGGGCG ACCGCCGACAGTATCCGCCACCTGGCTCGCATGGCCAGCGAGATGCGTCGCTCGGTGTCCGGCTTCACCTTGCCGGCACCTGCCGAGCCACGCTGAGGAG
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| DNA Sequence for Gene |
>H620_RS0120280
TTGTCCATGGCGTCTGCCGCAGTCACCCCCGAACGTCACGATACGGTTGCCCTGGCCTGGACCAAGGCAGCCATCCTCGATTGCCTTGGTCAGGCCCGCC AGGCGCTGGAGCGCTTTGCCGGGGAACCGGGCGACCTGTCGATACTGGCGTTCGTCGTCGATAACCTGCACCAGGTTCATGGTTGCTTGCGCATGCTTGA ATTGCGGGGCGCGGCCCACCTGGCTGAAGAATTGGAGCTACTGGCCAGGGCCTTGGCCGAAGGCCAGGTCAGCCCACGAGGAGAGTGCCTGGGCGCGGTG TTCCGGGGCCTGGAGCAGTTGCCCTCCTATCTGGAGCGGTTGCGCGGTGCGCGCCACGACTTGCCCTTGGTGATGTTGCCCTTGCTCAACCAACTGCGCA CCTGCCGTGGTGTAGGCCCGCTGGCCCAAGGCAGCCTGATCGGCGGCGCCGCCGAGCGCTTCGCCGGGGCCGACGACCTCGCCAACCTCGACCTGTCGCT GGGCAACTGGCGCGAGCAGATGCAGGCGGGGCCAGGGCGCGATGCCCTGCGCTCGGTGGTGACGGCGTTGTGCGATGACCTGATGCGCATCAAAGAGCGC CTGGACCATTTCGTGCGTGGCGACCGTCAGCACAGCGAGCAACTGGAAGACTTGCTGGCGCCCCTGCGCCATGTCGCCGACACCTTGGCGGTGTTGGGTT TCCAGCAACCACGACGGGTGATCATCGACCAGGTTCTGGCCCTGCAGGCACTGGCGCTCGGCGAGCGTGCAGCGGATGACGCCGTGCTGATGGATGTGGC AGGCGCGTTGCTGTACGTCGAAGCCACCCTCAACGGCATGGTCGGGCCACTGGAGGAAGGCGGCCAGGGCGGGCTGCCTGGCTCGGACCTGGCCGAAATT CGACAGCTGGTGCTGAGCGAGTCGCTGTCAGTGGTGCAGCAGGCCAAGGACCTGATCGGTGACTGCCTGGAATCCGGCTGGCCCCGGCAACGTCTGCAGC CCCTGCCAGGCTTGCTGCAGCAGGTGCGCGGCGCGTTGTCGATGCTCATGCTGCCGGTTGCCGCCGAGGTGTTTGCCGGCTGCGCAAGTTACGTCCAGGG GTGGTTGCAGCACCTGGACGTCGAACCGCCAGCGGACGAGCTCACGCACCTGGCCGAAGCACTGAGCGCTGCTGAGTGCTACTTGCAATGGCGGGTGGCC GATCCATTGGCCGATGGCCAGCCCTTCATCGACATGGCCCGTGCCAGCCTGGCGGCATTGGGGGTGCAATGCACGCTGGTCGAGACTGGCGCCGACTCGT CGGCCGGAAGCGACGGCATCGACGACGAACTGCGCCAGGTGTTCCTTGAGGAAGCCGGCGAATTGCTGCCGGACATCGAACGGCATTGGTTGCGCTGGCG GGCCGACAACCACCTGCGTGAAGCCTTGATCGAAGTGCGCCGCGCCCTGCACACGCTCAAGGGCAGTGGGCGCATGGTGCATGCCGAGGCGGTAGCGGAG CTGGCCTGGGGCGCCGAGCATTTGCTCAACCGCGTGCTGGAAGGGCGCATCGCGCTGGTGCCGGAGGCCGTGGTGACGTTGCAGCGGGTATTCGTTCACC TGCCCGACCTGCTGGCCGACTTTGCGGCAGGGCAGTTGCCACAACTGACCGAAATCGAACAGCTGGCGAGTCACCTGCACGTGCTGGCCGAGAACGATGC ACCTGCCAGCACCGAGGTCGAGGGTCTCGACCCGCAACTACTGGACATTTTCCGCAACGAGGCACAGGGGCACCTGGCTTGCCTGGACAGCTTCCTGCAG GAGGCGGCCGGCCACGACACCCCGGTGAGCGATGCCCTGCAGCGTGCCTTGCATACCTTGAAAGGCAGCGCGGCCATGGCGGGTGTCATGCCGATCGCCG AGCTGGCCACCGCATTCGACCGGCTGGTTCGTGAATACAAGGGGCATCAGTTGCCGCTGCAAGTCGCCGAGCTGCAATGGCTGGAAGCAGCGCGCACCTT GTTCCACCTTGGCCTGGCCCAGCTCGGCAGTACGCCGCTGGCGGCCATTGCCGGTGCGGCGCAATTGATAGAGCAGGTCGGGCAAAGGGTGGACGAGCGC CTGGCCACGCTGCATGAAGACCCCCAGCATGGGCGTCGAAGCAAACGGGATCCGCAATTGATCGCCAGTTTCCTGGGGCAAGGCATGGACATCCTGCTCG ATGCCGAGTCGCTGCTTTCACGCTGGCAGGAGCACCCCGGCCAGCGGCAGGAACTGGACACCCTGCTGGATGAACTGACCACCCTCGGTCACGGCGCGCA CTTGGCGGACCTGTGGCAGATGGATGATGTCTGCGAGGCGCTGCTGGATCTTTACGGGGCAGTGGAAGAGGGCAGCCTGGTTGCGGATGCGCGCTTCTTC GCCCAGGCCCAGCAGGCCCACGAGGCGCTGCTGGACATGCTCGACGAAGTGGCGGCGGGGCAGGAGGTCACGGCCAGGCCGGAGCGGATCGATGCGTTGC GCAGCCTGCTGGCCGAGGCCCTGGCACCGGATGCCACCGGCCTGGTGGGCCGCGATTCGGTCAAGCCTCTGCCGCCCGCCGTGGACCTTGAAGACCCGGC GTTGGCGCAACTGTTCCTCGAAGAGGCGCGGGACATCCTCGACAGTGCCGACCAGGCCTTGGAGCAATGGGGTCAGGAACCGGACAATCTTTCCACGCTC TCGTCCCTGCAACACGACATGCAGACCCTCAAGGGGGCTGCACAAATGGCTGCGGTCGGCGCGGTCGAGCGGCTGGCCCAAGAGCTTGGCCTTTTTTACG AGGCCCTGGTCGACCGCCGTCTTGGCTCAAGTACCGGGTTGATCGCTTTGCTACGGCGGGGCCACGCGGCCCTGGGCGAGATGCTCGACACTTTGCGCCA GGGCCAGCCGCCGTCTTCGGCGGTCGACTTGTTGGGCGAAATGCGCGAGGTGCGCCACGCGCCGCCACCGCCCAGCAGCGAGGCGATTGTGGAAGAGGCG GACAGCCCGGGCGACAAGGAACTGCTGGAAGTCTTCCTGGAAGAGAGCTCGGACATCGTCGAAAGTGCCGCCGAGGCCCTGGCGCGCTGGCAAGCCGACC CGCGCAGCAGCGTCGAGGTGGATAACCTGCTGCGTGACCTGCACACCCTCAAGGGCGGGGCACGCATGGTCGAAATCGCGGCCATCGGCGACCTGGCCCA TGAGCTGGAGTTCCTCTACGAACTGCTGGCCGCCGGGCGTCTGCCACCCAGCCCGCCATTGTTCGCCTTGCTGCAAAACTGTCACGACCGCCTGGCGCAC ATGCTCGATGCCGTGCGCCTGGGCCAGCCGTTGCATGCAGCCACGGCGCTGATCGACTACATCCGTAACTTCAGCAGTGCGGCCCTGACCGACAGCGCTG CCGGCCAGGCCCCGGCCGACGCGACACCGGCCGAAGCGCCCGCCACGACGCCCGAGCGGGCAGCGGGCGATATGGTCAAGGTCGATGCCGAGTTGCTCGA TGAGCTGGGTAACCTGGCCGGCGAGCATTCGGTGATTCGCGGGCGTATCGAGCAGCAGGTCAACGACGCGCAGTTCGCGTTGAACGAAATGGAAACCACG CTGGAGCGCATGCGCGATCAACTGCTGCGCCTGGACATCGAGACCCAGGGGCGGATTTCCAGCCGTCAGCAAATCGAGGGCGATGCCTACGACGACTTCG ACCCGCTGGAAATGGACCGTCACTCCCAGTTGCAGCAGCTGTCGCGGGCACTGTTCGAGTCGGCCTCCGACTTGCTCGACCTCAAGGAAACCCTGGCTCA GCGCGCCCAGGAGGCCTACAGCCTGCTGCAGCAGCAGGCACGGGTAGCCAGCCAGTTGCAGGAAGGCCTGACCGCGACCCTGATGGTGCCGTTCGAGCGG CTGGTGCCGCGCTTGCAGCGAGTGGTACGGCAGGTGGCGACCGAGCTGGGCAAGCAGGTGGAGCTGGTGGTCGGCAATGCCGAAGGCGAACTGGATCGCA GCGTTCTGGAGCGCATGGTAGCGCCCCTGGAACATATGCTGCGCAATGCCGTGGACCATGGTCTGGAGTCGCGTGAGGCACGCCTGGCCGCTGGCAAGCC GGAGCAGGGCACCATTCACCTGAACCTGCTGCACGAAGGCGCCGACATCGTCATCGAAATGACCGACGATGGTGCCGGTGTGCCGTTGGAGGCGGTGCGG CGCAAAGCGATCAAGCGCGGGTTGCTGGACCCGCAAGCACAATTGAGCGATCACGAAATCCTGCAGTTCATCCTGCGCCCAGGTTTTTCCACGGCCGAGA AGATCACCCAGATTTCAGGGCGCGGACTGGGCATGGATGTGGTCCATGAAGAGGTCAAGCAGCTGGGCGGCTCGATGAGCATCGAGTCGGCCCAAGGCAA GGGCGCGCGTTTCCTGATTCGCTTGCCGTTCACGGTGTCGATCAACCGCGCTCTGATGGTGCACCTGGGGGAAGAGCAGTACGCCATTCCGCTCAATACC ATCGAAGGTATCGTCCGCGTGCCGCCAGCGGAACTCGATGCCTGCTACCAACTGAGTTCGCCTCGCTATGTGTACGCCGGCCATGCCTACGAGCTGCGTT ATCTTGGCGAGTTGCTGCAGGGCGTGGCGCGGCCCAGCTTGCTGGGCCAGAGCGTGCCCCTGCCGGTCTTGCTGGTTCATTCCCAGGAGCAATCGTTCGC CATCCAGGTCGACAGCCTGTCACCCAGCCGTGAGATCGTGGTGAAGAGTCTGGGCCCGCAGTTCGCCGCAGTGGCGGGGCTGTCCGGTGCGACCCTGCTC GGTGACGGCCGCGTGGTGCTGATTCTTGACCTGCTGGGCCAGCTGCGGGGTCAGCAACGGCGTCTGGCACGCCTGCCGGGAGGCAGCGATGCGCAGCGCC AGGCATTTGGCCCCGCGCCACGACGGGCGCTGCTGGTGATGGTGGTGGACGACTCGGTTACCGTGCGAAAGGTCACCAGCCGCCTGCTGGAGCGTCACGG CATGAGCGTGTTGACGGCCAAGGACGGTGTAGATGCCATGACCCAGCTCGAAGAGCATCGGCCCGATGTGCTGCTGCTGGATATCGAAATGCCGCGCATG GACGGTTTCGAGGTGGCCACCCGCATTCGCCGCGACGAGCGCCTCAAGGACCTGCCGATCATCATGATCACCTCGCGTACTGGGCAGAAGCACCGTGATC GGGCGATGGCCATCGGCGTCAACGAATACCTCGGCAAGCCTTATCAGGAGTCGGTCCTGTTGCAGAGCATCGCCCACTGGAGCCAGACCCATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACTGATCGCAGGTCAGCGCAGCAGCCTGACCGGGTTGCTGCTGCCCCTGGGGGACCGCACCTTGGTATTGCCCAACGTTGCCGTGGCCGAGTTGCTTGGC CGACGTTCGCTGCCGTGCGAGCGCAACGCGCTGGCCTGGCACCTGGGCTGGATCGACTGGCGCCAGCAGCACTTGCCGTTGATCGGTTTCGAAGCGGCCT GCGGCGGCGAAACCCCCTGTGGCGAACGCGCGCGCATCGTCGTGCTCAATGCCTTGGGCGACACCGGGCTGCGTTACCTGGCGTTGTTGCTGCAGGACAT TCCCCGTTCGTGCAAGCTCGACAGCCAGCTCAACTATGTGGATGTGGCGCTGGGCAGCCTGGAGCTGGCAGCGGTGCAGGTGGGCGAGCAGGTGGCGCGG GTGCCGGACCTGGTGGCGCTGGAGCGGTTGGTGCGTGACGCGCAACTGCAACCTGTCGCCAGTTAGCATGTGCTTTGGCTGGCCCCTACACACAGCGAGT
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| Amino Acid Sequence |
>histidine kinase
MSMASAAVTPERHDTVALAWTKAAILDCLGQARQALERFAGEPGDLSILAFVVDNLHQVHGCLRMLELRGAAHLAEELELLARALAEGQVSPRGECLGAV FRGLEQLPSYLERLRGARHDLPLVMLPLLNQLRTCRGVGPLAQGSLIGGAAERFAGADDLANLDLSLGNWREQMQAGPGRDALRSVVTALCDDLMRIKER LDHFVRGDRQHSEQLEDLLAPLRHVADTLAVLGFQQPRRVIIDQVLALQALALGERAADDAVLMDVAGALLYVEATLNGMVGPLEEGGQGGLPGSDLAEI RQLVLSESLSVVQQAKDLIGDCLESGWPRQRLQPLPGLLQQVRGALSMLMLPVAAEVFAGCASYVQGWLQHLDVEPPADELTHLAEALSAAECYLQWRVA DPLADGQPFIDMARASLAALGVQCTLVETGADSSAGSDGIDDELRQVFLEEAGELLPDIERHWLRWRADNHLREALIEVRRALHTLKGSGRMVHAEAVAE LAWGAEHLLNRVLEGRIALVPEAVVTLQRVFVHLPDLLADFAAGQLPQLTEIEQLASHLHVLAENDAPASTEVEGLDPQLLDIFRNEAQGHLACLDSFLQ EAAGHDTPVSDALQRALHTLKGSAAMAGVMPIAELATAFDRLVREYKGHQLPLQVAELQWLEAARTLFHLGLAQLGSTPLAAIAGAAQLIEQVGQRVDER LATLHEDPQHGRRSKRDPQLIASFLGQGMDILLDAESLLSRWQEHPGQRQELDTLLDELTTLGHGAHLADLWQMDDVCEALLDLYGAVEEGSLVADARFF AQAQQAHEALLDMLDEVAAGQEVTARPERIDALRSLLAEALAPDATGLVGRDSVKPLPPAVDLEDPALAQLFLEEARDILDSADQALEQWGQEPDNLSTL SSLQHDMQTLKGAAQMAAVGAVERLAQELGLFYEALVDRRLGSSTGLIALLRRGHAALGEMLDTLRQGQPPSSAVDLLGEMREVRHAPPPPSSEAIVEEA DSPGDKELLEVFLEESSDIVESAAEALARWQADPRSSVEVDNLLRDLHTLKGGARMVEIAAIGDLAHELEFLYELLAAGRLPPSPPLFALLQNCHDRLAH MLDAVRLGQPLHAATALIDYIRNFSSAALTDSAAGQAPADATPAEAPATTPERAAGDMVKVDAELLDELGNLAGEHSVIRGRIEQQVNDAQFALNEMETT LERMRDQLLRLDIETQGRISSRQQIEGDAYDDFDPLEMDRHSQLQQLSRALFESASDLLDLKETLAQRAQEAYSLLQQQARVASQLQEGLTATLMVPFER LVPRLQRVVRQVATELGKQVELVVGNAEGELDRSVLERMVAPLEHMLRNAVDHGLESREARLAAGKPEQGTIHLNLLHEGADIVIEMTDDGAGVPLEAVR RKAIKRGLLDPQAQLSDHEILQFILRPGFSTAEKITQISGRGLGMDVVHEEVKQLGGSMSIESAQGKGARFLIRLPFTVSINRALMVHLGEEQYAIPLNT IEGIVRVPPAELDACYQLSSPRYVYAGHAYELRYLGELLQGVARPSLLGQSVPLPVLLVHSQEQSFAIQVDSLSPSREIVVKSLGPQFAAVAGLSGATLL GDGRVVLILDLLGQLRGQQRRLARLPGGSDAQRQAFGPAPRRALLVMVVDDSVTVRKVTSRLLERHGMSVLTAKDGVDAMTQLEEHRPDVLLLDIEMPRM DGFEVATRIRRDERLKDLPIIMITSRTGQKHRDRAMAIGVNEYLGKPYQESVLLQSIAHWSQTHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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