Pseudomonas sp. VLB120, PVLB_23520

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_23520
Name
Replicon chromosome
Genomic location 5180940 - 5181674 (- strand)

Cross-References

RefSeq YP_008765610.1
GI 557225395
Entrez 17499339
INSDC AGZ37483.1
NCBI Locus Tag PVLB_23520
UniParc UPI0003C0B290
UniProtKB Acc U5VKF6
UniProtKB ID U5VKF6_9PSED
UniRef100 UniRef100_U5VKF6
UniRef50 UniRef50_D7HU66
UniRef90 UniRef90_Q88QY9

Product

Feature Type CDS
Coding Frame 1
Product Name
lipopolysaccharide kinase
Synonyms
Evidence for Translation
Charge (pH 7) 19.10
Kyte-Doolittle Hydrophobicity Value -0.582
Molecular Weight (kDa) 28.8
Isoelectric Point (pI) 10.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 16 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004615 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_23520

Human Homologs

References

No references are associated with this feature.