Pseudomonas sp. VLB120, PVLB_21710

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. VLB120, complete genome. [Details]
DNA Sequence Upstream of Gene
ACCTTGGCGGCTGGCTTGGCAGCGACGGACTCGACGGCCGGCTCTGCAACCGCCTTGGCAGTTTTGCGCAGCTCGGCCAGCGACGGGCTCTTGCTCTTCG GCGCGCTAGCCGCGCCAGATTTGTCCAGCGAACGCTGGCAAGACTTGCAGGATACGTCCTCGGTCACGGCAGTGCTGACAAGGGTCTGACTGCTGCGCCC GCAGGCGGAATCGAGGCCATTGGTGGAATAGTGGGTAACCAAAACCGAACATCTCCGATGCGTTGTCATTGAAGCGGCCGGCATTCTCGCACAGGTTGCA GGGGCTTGCCGAACCCCCCCAGCGGGCGACGACCGTCGGCACAGGACAGCAGCGCTGGCACTTTGCCATAATGATTGGCATGCTAGCCCCTTTCCGGTGT CCCGCCGTATAGTGCGCCACGCCAGCACGGCCACGGCCTTGCGGCACACACCGTGCATGATCAAACCCTGCCATCGCCAGCCCAATTGCAGGACCACCGC
DNA Sequence for Gene
>PVLB_21710
TTGACCGATCTCACACACTCGCCCTCGCTGCGACCTGCCTCCTCCGCTCCGGCTGCGTCCGTGCGCGGCTCGGTCAAAGGTGCGCTGGCCCTGCTGGCCC TGGTTCTGCTGGGTTTGCTGCTGTGGCAGCTGTTCGCCCAGTTCCATCACACGCAGGCGGAGCTGCGTCAACAAAGCCTGGCGACCAGTGCCGACCTGGC GGACCACCTGGGCCTGAACATGGCGCTCAAAGCCCAGGAGGCTGTGAATGTGGTCCAGCCCTACGTCAAAACGCCGACGCCCGCAGCACTGCCCAGCCTG CTGCAAACCCTGCGCGAACGCCTGCCCGAGCTGCGGGAACTGGCCTGGCTCGATGCTGCCGGTAACGTGCGCGGCGACAGCCTGGCGGGCAGCCCAGACC GCCAGTGGATTGACGAGCTGGTCGAACTGGCCAAGGGCCGCGCCTACTTTTTCTCCAACTCGGACGATAACCGTACCGTCTACCTGCTGTTGCGCCAGTC GACCGAGCAGGATCGCGGTTACTGGCTGCTGCGCCTTGCGCCCTCCTACTACAGGACCCTGACGATTCACCTCGATGGCGTAAGCCACCCCTTGTGGCTG CTGGAAAACAGCCGCAGCGGCGATGTGCTGGAGCGCCATGCCCCGGTGCAAACCAGCAATGAGCCGTTGCAAAGCGTCATGCTGGCTTTCATCGACAACA GCGCATGGCAGTTGCGCGGGCTGTTCGATGCCGGCCTGGCCCGGCAGAAGCTGCTGCCGGCGCTGATCGGCAAATGCATGCTGGTGCTGTTCTGCGCGCT GCTGCCGGTGCTGGCATTGATCAACATGCGCCGACGCCAGCAGGCCCTGCAGGAGGACCGCCGCCGCTACCAGGACATCTTCGAGGGCACGGGCGTGGCC TTGTGCGTGCTCGACCTCTCCAGCCTGCCCGGCCAGCTCGACCGCTACCACCTGCGCAACCTGGCCGCGCTCAAGCAAAGCCTGGCGCTGGACCCGAACC TGCGCCGCGCCCTGCTGCTGGAACTGAAAATCACCGAAATCAACCAAGTGGCGCGCCAGTTGCTCAATGTCGACTGCAACGAAGGCGCCTGGCAGCGCCT GATCGACGGCAGCGGCGATGGCCGCGACAGCGTCGGCATGCAACTGATCGACGCGCTGATCGAACAGCGCCCTGTGCTGGAACTCGAAGTCCGCCTGCCC GCCCCGCTCGGTGGAGAACTGCACCTGTGGCTTATGGCCCGCCTGCCGCAGCAGCGGCGCAACTACCAGGCGGTCATCCTCAGCATCAGCGACATCACCA GCCGCAAGCAGGTGGAGCTGTCGCTGCTCGAACGCGAAAGTTTCTGGTCGGACGTGGTGCGCACCGTACCCGACCAACTGTATGTGCAGGACGTCTTCAA CAAGCGGATGATCTTCAGCAACCGCCACCTCGGCCAGACCCTGGGCTACGACCGCAGCGAGCTGGCGCAGATGGGCGACCGCTTCTGGGAGCTGCTGCTA CACCCCGAAGACGCCGAACACTACAAGGCACTGCTTCAGCATCAACGCGAGACCGGCCACAGCGAGTCGCTGCATTGCCAACTGCGCTTCCGCCACCGCG ACGGCAACTGGCGCTGCTATGAGATTCGCGAACAGGTGCTGACCCGCGACGCCGATGGCGTCGTCACCCGTATCATCGGGGTGGGCAAGGACGTGACCGT GCAGATCGAGGCCAGCCAGTCTCTGCGCGACAGCGAACAACGCTACCGCATGCTCGCCGAGAGCATCAGCGATGTGATCTTCTCCACCGACAGCCAGCTG CAGCTCAACTACGTCAGCCCGTCGGTGCATGCCGTGCTGGGCTACCGGGCCGAGTGGATCTTCGAGAACAGCTGGCAGTCGATCGTCGCCAACCCGGCCC AGCTCACCGGCATCTATAGCCTGATGGAACGGGTCAGCAAAGCCATGGGCGACCGCGAACAGCTGGCGCAGCTGCGCAGCCAACTGCCCTCCCAGCTGTT CCTGTTCGACTGCCTGCGTGCCGATGGCCGCAAGATTCCCATCGAACTGCGCCTGGTACTGGTGTGGGACGAGCACGAGCGCTTCGAGGGGGTACTGGGG GTTGGCCGCGACATCAGCCAGCAGCGCCGCGCGGAAAAAGACCTGCGCATGGCCGCCACGGTATTCGAGCACTCGACTTCGGCCATTCTGATCACCGACC CGGCCGGCTACATCGTCCAGGCCAACGAAGCGTTCAGCCGCGTCAGCGGCTATGCGGTGGAGGAAGTACTCGACCAACTGCCCGGCATGCTGACCGTCGA TGAGCAGCAGGAAGGCCACCTTGCCTACGTGCTCAAGCAATTGCACCAGCGCGGCAGTTGGGAAGGCGAAGTGTGGCTCAAGCGTCGCAATGGCGAGCCG TACCCGGCATGGGTCGGCATCACCGCCGTGCTCGACGACGAAGGCGACCTGGCCAGCTACGTGTGCTTCTTCACCGACATCAGCGAGCGCAAGGCCAGCG AGCAACGCATTCATCGCCTGGCCTACTACGATGCCCTGACGCACCTGCCCAACCGCACATTGTTCCAGGACCGCCTGTACAACGCGCTGCAGCAGGCCGA TCGGCAGAAGGCCTGGGTGGTGCTGATGTTCCTCGACCTGGACCGCTTCAAGCCGATCAACGACTCCCTCGGCCACGCCGCGGGCGATCGCATGCTCAAG GACATGGCCCTGCGCCTGCTGGCGTGCGTCGATGACGACGACACCGTGGCGCGCATGGGCGGCGACGAATTCACCCTGTTGCTGCAACCGCGCGCCACCC GTGAAATGGCGCTCAACCGCGCCATCCACGTGGCCGAAAACATCCTCGCGAGCCTGGTGCGGCCGTTCGTGCTGGAAAACCGTGAGTTCTTCGTCACCGC CAGTATCGGTATCGCCCTCAGCCCGCAGGACGGCAGCGAACTGAGCCAACTGATGAAGAACGCCGACACGGCCATGTACCACGCCAAGGAGCGCGGCAAG AACAACTTCCAGTTCTACCAGGCCGAGATGAACGCCAGTGCCCTGGAGCGCCTGGAACTGGAAAGCGACCTGCGCCATGCCTTGGAGCAGAACGAATTCA TTCTGTACTACCAGCCGCAGTTCAGCGGCGACGGCAAGCGCCTGACCGGTGCCGAAGCGCTGCTGCGCTGGCGCCACCCCACCCGTGGCCTGGTGCCGCC GGGCGATTTCATTCCGGTGATCGAGGAGCTGGGCCTGGTGGTGGATGTGGGTGACTGGGTGCTGCGCGAGGCCAGCCGCCAACTGAAGGCCTGGCACAAG GAGAAAGTCCGTGTGCCGAAGGTGTCGGTGAACATTTCCGCACGGCAGTTCTCCGACGGCCAACTGGGCACGCGCATCGCCACCATTCTGGAAGAGACCG GCCTGCCGCCGGCGTGCCTGGAGTTGGAGCTGACCGAAAGTATCCTGATGCGCGAGGTCAACGAGGCGATGCAGATTCTCGACAGCCTCAAGAACCTTGG CCTGAGCATTGCCGTCGACGACTTCGGCACTGGCTACTCGTCGCTCAACTACCTCAAGCAGTTCCCCATCGACGTGCTGAAGATCGACCGCACCTTCGTC GATGGCCTGCCCGAAGGCGAACAGGATGCCCAGATCGCCCGGGCGATCATCGCCATGGCCCATAGCCTCAACCTGGCGGTGATCGCCGAAGGCGTGGAAA CCCATGAGCAGTTGGAGTTCCTGCGTGAGCACGGCTGCGACGAAGTGCAGGGCTACCTGTTCGGACGGCCGATGCCGGCCAACCAGTTCGAGGCGCAATT CAGCAACGAAACGCTGTTCATGTTCCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCGATGGCAGCACAGAGGCGGCGGAAAACGGACTTTCGAGTCAACTCACGCCCCCAGCCAGCCCAGACACGGCGCGGGATCCAACATGAAGGCCATTGG TCCGCGACTTGATGCCACTTCATATGCCAGGCGCGAATCAATCGGTTAGAATGCCCCCCCAATTCACCCCGATCCTTGAGGACCGCCATGTTCAGCCGTG ATTTGACCATTGCCAAGTACGACGCCGAGCTCTTCGAAGCCATGCAGCAAGAAGCTCTGCGCCAGGAAGAGCATATCGAGCTGATCGCTTCGGAAAACTA CACCAGCCCGGCAGTCATGGAAGCCCAGGGCTCGGTCCTGACCAACAAGTACGCCGAAGGCTACCCAGGCAAGCGCTACTACGGTGGCTGCGAATACGTC GACGTGGTCGAGCAACTGGCCATCGACCGTGCCAAGCAGCTGTTCGGCGCCGACTATGCCAACGTCCAGCCGCACGCCGGTTCCCAGGCCAACGCTGCCG
Amino Acid Sequence
>PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
MTDLTHSPSLRPASSAPAASVRGSVKGALALLALVLLGLLLWQLFAQFHHTQAELRQQSLATSADLADHLGLNMALKAQEAVNVVQPYVKTPTPAALPSL LQTLRERLPELRELAWLDAAGNVRGDSLAGSPDRQWIDELVELAKGRAYFFSNSDDNRTVYLLLRQSTEQDRGYWLLRLAPSYYRTLTIHLDGVSHPLWL LENSRSGDVLERHAPVQTSNEPLQSVMLAFIDNSAWQLRGLFDAGLARQKLLPALIGKCMLVLFCALLPVLALINMRRRQQALQEDRRRYQDIFEGTGVA LCVLDLSSLPGQLDRYHLRNLAALKQSLALDPNLRRALLLELKITEINQVARQLLNVDCNEGAWQRLIDGSGDGRDSVGMQLIDALIEQRPVLELEVRLP APLGGELHLWLMARLPQQRRNYQAVILSISDITSRKQVELSLLERESFWSDVVRTVPDQLYVQDVFNKRMIFSNRHLGQTLGYDRSELAQMGDRFWELLL HPEDAEHYKALLQHQRETGHSESLHCQLRFRHRDGNWRCYEIREQVLTRDADGVVTRIIGVGKDVTVQIEASQSLRDSEQRYRMLAESISDVIFSTDSQL QLNYVSPSVHAVLGYRAEWIFENSWQSIVANPAQLTGIYSLMERVSKAMGDREQLAQLRSQLPSQLFLFDCLRADGRKIPIELRLVLVWDEHERFEGVLG VGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVEEVLDQLPGMLTVDEQQEGHLAYVLKQLHQRGSWEGEVWLKRRNGEP YPAWVGITAVLDDEGDLASYVCFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQADRQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLK DMALRLLACVDDDDTVARMGGDEFTLLLQPRATREMALNRAIHVAENILASLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGK NNFQFYQAEMNASALERLELESDLRHALEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHK EKVRVPKVSVNISARQFSDGQLGTRIATILEETGLPPACLELELTESILMREVNEAMQILDSLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFV DGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMPANQFEAQFSNETLFMFQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site