Pseudomonas sp. VLB120, PVLB_16555

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_16555
Name
Replicon chromosome
Genomic location 3659633 - 3661075 (+ strand)

Cross-References

RefSeq YP_008764221.1
GI 557224006
Entrez 17497916
INSDC AGZ36094.1
NCBI Locus Tag PVLB_16555
UniParc UPI0003C0A01C
UniProtKB Acc U5VH38
UniProtKB ID U5VH38_9PSED
UniRef100 UniRef100_U5VH38
UniRef50 UniRef50_Q9I3G0
UniRef90 UniRef90_Q1ICG8

Product

Feature Type CDS
Coding Frame 1
Product Name
cbb3-type cytochrome c oxidase subunit I
Synonyms
Evidence for Translation
Charge (pH 7) 13.23
Kyte-Doolittle Hydrophobicity Value 0.545
Molecular Weight (kDa) 53.6
Isoelectric Point (pI) 9.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 279 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001566 (1638 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_16555

Human Homologs

References

No references are associated with this feature.