Pseudomonas sp. VLB120, PVLB_11795

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. VLB120, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCAGATGAACTTCGTCGACAACCAGGTCAACCCACGTACCGGCACCATCCGCGGCCGCGCCGTGTTCGATAACCGCGACGGCCAGTTCACGCCAGGCCT CTATGCGCGGCTGAAGCTGGTCGGCAGCGCCCAGTACGATGCGGTGCTGATCAACGACGAAGCCGTGGGTACGGACCTTGGCAAGAAGTTCGTGCTGGTC ATGGACAAGGACAACAAGGCCAGCTATCGCCCAGTAGAACTGGGGCCGAAGCTCGAAGGCCTGCGCATCGTGCGCAGCGGTCTGACCAAGGACGATCGCA TCGTGGTCAAGGGCCTGCAGCGTGTGCGTCCGGGGTCGCCAGTGACGCCGGAAGAAACGCCTATGGCCAGCGAGCAGACCCTCGCCGCCCTCGCCCAGCA ACGCCAAGCCCTCGAGGCCAGCAATCGGACGCAGAAGGTAGCGGGCTCCACCGAAAAAGTCGCCAGCGCCCAAGCGCCACGCGGTTAAGGGATCACACCG
DNA Sequence for Gene
>PVLB_11795
ATGAACTTTTCGAAATTCTTCATTACCCGGCCGATCTTCGCTGCCGTGCTGTCGCTGGTGCTGTTGATCGCGGGCTCGATCTCGCTGTTCAAGCTGCCGA TCAGCGAATACCCGGAAGTGGTACCGCCCACCGTGGTGGTGCGCGCCAACTTCCCCGGCGCCAACCCCAAGGTGATTGGCGAAACCGTCGCAGCGCCGTT GGAGCAGGCCATCACTGGTGTCGAGAACATGCTGTACATGTCCTCGCAGTCCACCGCCGATGGCAAGCTGACCCTGACCATCACCTTTGCCCTGGGCACC GACCTGGACAACGCGCAGGTGCAGGTACAGAACCGCGTCACGCGTACCCAGCCCAAGCTGCCTGAGGAAGTGACCCGCATTGGTATCACCGTCGACAAGG CATCGCCCGACCTGACCATGGTCGTGCACTTGACCTCGCCGGACAACCGCTACGACATGCTCTACCTGTCCAACTACGCCATCCTCAACATCAAGGACGA ACTGGCGCGCCTGGGCGGCGTCGGCGACGTGCAACTGTTCGGCATGGGCGACTACTCGCTGCGGGTATGGCTCGACCCGAACAAGACCGCTTCGCGTAAC CTGACCGCCAGCGATGTGGTGGCCGCCATTCGCGAGCAGAACCGCCAGGTGGCCGCCGGCCAGCTGGGCGCCCCGCCCGCCCCTGGCAGCACCAGCTTCC AGCTGTCGATCAACACCCAAGGTCGCCTGGTCAACGAGGAAGAGTTCGAGAACATCATCATCCGTGCCGGTGCCGATGGCGAAATCACTCGCCTGAAGGA CATCGCCCGCGTCGAGCTGGGCTCCAGCCAGTACGCACTGCGCTCGCTGCTGAACAACCAGCCGGCGGTGGCCATCCCGATCTTCCAGCGGCCTGGCTCG AACGCCATCGAAATCTCCGACGAAGTGCGGGCGAAAATGGCCGAGCTGAAGAAGGACTTCCCGGAAGGGATGGACTACAGCATCGTCTATGACCCGACCA TCTTCGTTCGTGGCTCCATCGAAGCGGTAGTGCACACCTTGTTCGAAGCGCTGGTGCTGGTAGTGCTGGTGGTGATCCTGTTCCTGCAGACCTGGCGCGC CTCGATCATCCCGCTGCTGGCCGTCCCGGTGTCGCTGATCGGCACCTTCGCGGTGATGCACCTGTTCGGTTTCTCGCTCAATGCCCTGTCGTTGTTCGGG TTGGTATTGGCCATCGGTATCGTGGTGGACGACGCCATCGTCGTGGTGGAGAACGTCGAACGTAACATCGGGCTTGGCCTGAAACCGCTTGAGGCCACGC AAAAGGCCATGGGCGAAGTGACCGGTCCGATCATTGCCACTGCCCTGGTGCTGTGCGCGGTGTTCGTGCCTGCTGCGTTCATTTCTGGCCTGACCGGGCA GTTCTATAAGCAGTTCGCCCTGACCATCGCCATTTCGACCGTGATTTCGGCATTCAACTCGCTGACCCTGTCGCCGGCGCTGGCTGCCGTGCTGTTGAAG GAGCATCACGCGCCCAAGGACCGCTTCTCGCGGTTCCTCGACAAGCTGCTGGGTAGCTGGCTGTTCGCGCCGTTCAACCGTTTCTTCGACCGTGCCTCCA ATCGCTACGTCGGCGGCGTGCGCCGGGTCATCCGCTCCAGCGGCATCGCCCTGTTCGTCTACGCTGGCCTGATGGGCCTCACCTACCTGGGCTTTTCGTC CACCCCGACCGGTTTCGTACCGGCCCAGGACAAGCAGTACCTGGTGGCCTTTGCCCAGTTGCCAGACGCGGCGAGCCTCGACCGTACAGAGGCGGTCATC AAGCGCATGAGCGAAATCGCCCTCAAGCAACCCGGCGTCGCCGACTCGGTAGCCTTCCCGGGGCTGTCGATCAACGGCTTCACCAACAGCCCCAATAGCG GCATCGTGTTCACCCCGCTCAAGCCGTTCGATGAGCGCAAGGACCCGAGCCAGTCGGCTGCAGCCATCGCCGCTGCGTTGAATGCCCAGTTCGCTGACAT CCAAGACGCCTACATCGCGATCTTCCCACCGCCACCGGTACAAGGCCTGGGCACCATCGGCGGCTTCCGCCTGCAGATCGAAGACCGGGGCAACCTGGGC TACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTGCCGGAGCTGGCTGGCCTGTTCACCAGTTACCAGGTCAATGTGCCAC AAGTCGATGCCGCCATCGACCGTGAGAAGGCCAAGACCCATGGCGTGGCGATCACCGACATCTTCGACACCCTGCAGGTCTACCTCGGCTCGCTGTACAC CAACGACTTCAACCGCTTCGGTCGCACCTACCAGGTCAACGTCCAGGCCGAACAGCAGTTCCGCCTCGATGCCGAGCAGATCGGCCAGTTGAAGGTACGC AACAACCTCGGCGAGATGATCCCGCTGGCGACCTTCCTCAAGGTCAGCGACACCTCCGGACCTGATCGGGTGATGCACTACAACGGTTTCATCACCGCGG AAATCAACGGCGCGGCCGCACCTGGCTACAGCTCCGGCCAAGCCGAGGCCGCCATCGAGAAGCTGCTCAAAGAGGAACTGCCCAATGGCATGACCTTCGA ATGGACCGACCTGACCTACCAGCAGATCCTCTCGGGCAATACCGCACTGCTGGTGTTCCCGCTGTGCGTGCTGCTGGCGTTCCTGGTGCTGGCCGCCCAG TATGAAAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCGATGACCCTGCTGTCGGCCATTACCGGGGTGATCGTATCGGGTGGCGACAACAACA TCTTCACCCAGATCGGCTTGATCGTACTGGTCGGACTGGCATGCAAGAACGCGATTCTGATCGTCGAGTTCGCCAAGGATGAACAGGCCAAGGGCCTGGA CCCATTGGCGGCTGTACTGGAAGCCTGCCGTCTGCGCCTGCGCCCGATCCTGATGACCTCGATCGCCTTCATCATGGGTGTGGTACCCCTGGTGTTCTCC TCCGGCGCCGGATCGGAAATGCGCCATGCCATGGGTGTCGCGGTGTTCTCGGGAATGATCGGGGTGACCGTGTTCGGGCTGTTCCTGACGCCAGTGTTCT TCTTCCTGATCCGCCGTTTCGTCGAGCGTCGCCAGGCCCGCAAGGCTTCGCACGTGCCATCGCTGGAGAGCCACGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCTGCTCAAACCCCTGACGCCTAGCCTGCTGGCACTGGCCCTGGCGGCCTGCGCGGTGGGCCCGGACTACAAGACACCGGACACCGAACCTGCGCATCT GGACACCCAGGCCCAAGCCCAGGCGTTCGATCGCAGCCACTTCGAAAGCGTGTGGTGGAAGCAGTTCGACGACCCGGTGCTCAACCAGCTGGTGCAGGCC TCGTTGGAAGGCAACCGCGACTTGCGCGTGGCCTTCGCCCGCCTCAAGTCGGCGCGGGCGATCCGTGAGGATGCCTCGAACGATCAACTGCCGGTGGTGA CCAGTCGCGCCAGCAGCGAAATCGGCAAGGGCCAGATTCCCGGCCAGACCGAACAGCGAGTCAACAGCGAGCGCTATGATTTGGGCCTGGACATGGCTTG GGAGCTCGACCTTTTCGGCCGCATCCAACGCCAGATCGAGGCCAGCGAAGCCCAGGAGGCAGTCGCCCAGGCCGACCTGCAACAGCTGCAGGTCAGCCTG
Amino Acid Sequence
>hydrophobe/amphiphile efflux-1 (HAE1) family protein
MNFSKFFITRPIFAAVLSLVLLIAGSISLFKLPISEYPEVVPPTVVVRANFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGT DLDNAQVQVQNRVTRTQPKLPEEVTRIGITVDKASPDLTMVVHLTSPDNRYDMLYLSNYAILNIKDELARLGGVGDVQLFGMGDYSLRVWLDPNKTASRN LTASDVVAAIREQNRQVAAGQLGAPPAPGSTSFQLSINTQGRLVNEEEFENIIIRAGADGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS NAIEISDEVRAKMAELKKDFPEGMDYSIVYDPTIFVRGSIEAVVHTLFEALVLVVLVVILFLQTWRASIIPLLAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGLKPLEATQKAMGEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLK EHHAPKDRFSRFLDKLLGSWLFAPFNRFFDRASNRYVGGVRRVIRSSGIALFVYAGLMGLTYLGFSSTPTGFVPAQDKQYLVAFAQLPDAASLDRTEAVI KRMSEIALKQPGVADSVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSQSAAAIAAALNAQFADIQDAYIAIFPPPPVQGLGTIGGFRLQIEDRGNLG YEALYKETQNIIAKSHNVPELAGLFTSYQVNVPQVDAAIDREKAKTHGVAITDIFDTLQVYLGSLYTNDFNRFGRTYQVNVQAEQQFRLDAEQIGQLKVR NNLGEMIPLATFLKVSDTSGPDRVMHYNGFITAEINGAAAPGYSSGQAEAAIEKLLKEELPNGMTFEWTDLTYQQILSGNTALLVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVIVSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDEQAKGLDPLAAVLEACRLRLRPILMTSIAFIMGVVPLVFS SGAGSEMRHAMGVAVFSGMIGVTVFGLFLTPVFFFLIRRFVERRQARKASHVPSLESHA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site