Pseudomonas sp. VLB120, PVLB_05325

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. VLB120, complete genome. [Details]
DNA Sequence Upstream of Gene
CGCTCGTTCGCCCGCCGTGGCGACGACCGCGGCCAGGCTTCGCTGGCCAAGGCCGTGGAAGCCTGCCTGCAGGTGCTGGGCAACCGCATCGCCGGCTGCC AGCTGCGACTGCACAGCCAGTTCGATGACCAGCAGTTGGCCATCGACCAGACCCGTCTCGAGCAGATTCTGGTCAACCTGATCGGCAACGCCCTTGATGC CATGGCCAGCCAACCGCATCCGGAACTCTGGTTGGAAGGCGAACTGCAGGACGACAAGTACCGGCTGCGAGTACGCGATAATGGCCATGGCATTGACCCC GAAACACGCAAGCACCTGTTCGAACCTTTCTTCACCACAAAACCGGGCGAACATGGCCTGGGCCTGGGGTTGACCCTGTCGGCGAGCCTTGCCGCCGCCG CCAAGGGCACCCTGAGCGTCGAGCACCCCGCCAGCGGCGGGACTGCCTTCGTGCTGGCCCTGCCCCTGGCCACGCCCCCTAGCGAATCGGCAGAGCACCC
DNA Sequence for Gene
>PVLB_05325
ATGAACCAAGCACCTCTCACTGTCCTGATCGTCGAAGACGACCCGCATGTGCTGCTCGGCTGCCAACAGGCACTGGCCCTGGAAGATATCGCCTGCGAAG GCGTCGGCAGTGCCGAACAAGCACTGGAACGTATTGGCGATGACTTCGCTGGCATCGTCGTCAGCGATATCCGCCTGCCGGGCATCGACGGCCTGGAATT GCTGAACCGGCTCAAGGCCCGCGACCGCAGCCTGCCCGTGGTGCTGATCACTGGCCACGGCGACATCGACATGGCGGTGGGCGCAATGCGCAACGGTGCC TACGACTTCATGGAAAAGCCCTTCTCGCCAGAACGATTGGTCGATGTGGTACGCCGGGCCCTGGAGCAACGCGGCCTGTCGCGCGAGGTAGTGGCCCTGC GCCGCCAGTTGGCGAGTCAAAGTAGCCTGGAGGGACGCATCATCGGCCGTTCACCGGCCATGGAGCACCTGCGCGAGCTGATCGCCAATGTCGCCGACAC TTCGGCCAACGTGCTGATCGAAGGCGAGACCGGTACCGGCAAGGAGCTGGTCGCCCGTTGCCTGCACGATTTCAGCCGCCGCCACGGCCAACCATTCGTT GCCTTGAACTGCGGCGGCCTTCCGGAAAACCTCTTCGAAAGCGAGATTTTCGGCCACGAAGCCAATGCCTTCACCGGCGCCGGCAAGCGCCGCATCGGCA AGATCGAGCATGCCAATGGCGGCACGCTGTTCCTTGACGAAGTCGAAAGCATGCCGATCAACCTGCAGATAAAACTGCTGCGTGTCCTGCAGGAACGCAC ACTGGAACGCCTGGGCTCGAACCAGAGCATCCCGGTAGACTGTCGGGTGATCGCCGCGACCAAGTCCGACCTCGACGCGCTGGGTCAGAGCGGCCAATTC CGCAGCGACCTGTATTACCGCTTGAACGTGGTCACCCTGGAACTGCCGCCACTGCGTGAGCGTCGCGAAGACATCCTGCAGTTGTTCGAACACTTCCTGC AGCAGTCTGCATTACGCTTCGACCGCGACGTCCCCACGCTCGACAGCCAGACCCTCTCGCGCCTGATGGCCCATGACTGGCCAGGCAACGTGCGTGAGCT ACGCAACGTTGCCGAGCGCTATGCGCTGGGCCTGCCAGCGTTCAAGAAAAGCAGCAGTGGTGGCGCCGCCCAGGGCCTGGGGTTCTCCGAGGCCGTCGAG GCATTCGAGCGCAACCTGCTCAGCGATGCCCTTCAGCGCACTGGCGGCAACCTCAGCCAGGCCAGCCAGGAACTGGGCATGGCCAAGACGACACTGTTCG ACAAAGTGAAAAAGTACGGCCTCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATTCAACCTGATCTGGATATACGACGTGGACTTGGTATTCAAAGCGGCCCTGGGCGCTGGGGTCGTCGTTCTGCTGGCCATTCTTTCAAAGACCCGCAAC TACTACATCGCCGGGCTGGTGCCGTTGTTTCCCACCTTCGCCCTGATCGCCCACTACATCGTGGGCAAAGGGCGTGGTGTCGAGGACCTGAAGACCACGA TCCTGTTCGGAATGTGGTCGATCATTCCCTACTTCGTCTACCTGGCGGCCTTGTACGTACTGGTAGACCGGATGCGCCTTGAAGCATCGCTGGCGCTGGC GACTGTGGCCTGGTTGATGGCGGCAACGGTGCTGGTGACGGTTTGGGTGCGGATGCACTGAGGGAACCCGCGTGCCTGCGGTTCAAAGCCCGGCAATGTG CGTGACACCTTCGCGTTGCGACTGCAGGTAGGGTAGAACCGCCCCCAGCAACGGCGCCTTGAACGGCTCCTGGAACCGATGCGCCAACCCCGGTATCAGC
Amino Acid Sequence
>Fis family two component sigma-54 specific transcriptional regulator
MNQAPLTVLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLPGIDGLELLNRLKARDRSLPVVLITGHGDIDMAVGAMRNGA YDFMEKPFSPERLVDVVRRALEQRGLSREVVALRRQLASQSSLEGRIIGRSPAMEHLRELIANVADTSANVLIEGETGTGKELVARCLHDFSRRHGQPFV ALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANGGTLFLDEVESMPINLQIKLLRVLQERTLERLGSNQSIPVDCRVIAATKSDLDALGQSGQF RSDLYYRLNVVTLELPPLRERREDILQLFEHFLQQSALRFDRDVPTLDSQTLSRLMAHDWPGNVRELRNVAERYALGLPAFKKSSSGGAAQGLGFSEAVE AFERNLLSDALQRTGGNLSQASQELGMAKTTLFDKVKKYGLG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site