Pseudomonas sp. VLB120, PVLB_00015 (recF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. VLB120
GCF_000494915.1|latest
Locus Tag
PVLB_00015
Name
recF
Replicon chromosome
Genomic location 2692 - 3795 (+ strand)

Cross-References

RefSeq YP_008760940.1
GI 557220725
Entrez 17499421
INSDC AGZ32813.1
NCBI Locus Tag PVLB_00015
UniParc UPI0003C0A41B
UniProtKB Acc U5V713
UniProtKB ID U5V713_9PSED
UniRef100 UniRef100_U5V713
UniRef50 UniRef50_P13456
UniRef90 UniRef90_P13456

Product

Feature Type CDS
Coding Frame 1
Product Name
recombination protein F
Synonyms
Evidence for Translation
Charge (pH 7) 5.92
Kyte-Doolittle Hydrophobicity Value -0.377
Molecular Weight (kDa) 41.9
Isoelectric Point (pI) 8.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 464 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000003 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PVLB_00015
Search term: recF

Human Homologs

References

No references are associated with this feature.