Pseudomonas chlororaphis O6, PchlO6_5742 (soxB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis O6
GCF_000264555.1|latest |
| Locus Tag |
PchlO6_5742
|
| Name |
soxB
|
| Replicon | chromosome |
| Genomic location | 6316443 - 6317693 (- strand) |
Cross-References
| RefSeq | WP_009051223.1 |
| GI | 496342045 |
| NCBI Locus Tag | PchlO6_5742 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
sarcosine oxidase subunit beta
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 6.93 |
| Kyte-Doolittle Hydrophobicity Value | -0.163 |
| Molecular Weight (kDa) | 45.3 |
| Isoelectric Point (pI) | 8.46 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004970 (512 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PchlO6_5742
Search term: soxB
Search term: sarcosine oxidase subunit beta
|
Human Homologs
References
No references are associated with this feature.