Pseudomonas sp. CFII64, CFII64_06655
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 235 | 259 | - |
| Gene3D | G3DSA:3.55.50.10 | - | - | - | 94 | 188 | 1.9E-58 |
| Gene3D | G3DSA:4.10.220.110 | - | - | - | 224 | 286 | 1.9E-58 |
| Gene3D | G3DSA:2.30.110.50 | - | - | - | 19 | 330 | 1.9E-58 |
| SUPERFAMILY | SSF69279 | Phage tail proteins | - | - | 278 | 397 | 2.21E-14 |
| PANTHER | PTHR32305 | - | - | - | 70 | 197 | 8.7E-15 |
| SUPERFAMILY | SSF69279 | Phage tail proteins | - | - | 10 | 184 | 1.36E-46 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 261 | 275 | - |
| NCBIfam | TIGR03361 | JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain | IPR017847 | Type VI secretion system, RhsGE-associated Vgr family subset | 10 | 527 | 3.6E-68 |
| Gene3D | G3DSA:2.40.50.230 | - | IPR037026 | Vgr protein, OB-fold domain superfamily | 388 | 486 | 2.1E-6 |
| Pfam | PF05954 | Phage tail baseplate hub (GPD) | - | - | 29 | 329 | 9.6E-52 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 235 | 275 | - |
| NCBIfam | TIGR01646 | JCVI: type VI secretion system tip protein VgrG | IPR006533 | Type VI secretion system, RhsGE-associated Vgr protein | 21 | 484 | 3.9E-44 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.