Pseudomonas sp. CFII64, CFII64_05560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. CFII64
GCF_000416235.1|latest
Locus Tag
CFII64_05560
Name
Replicon contig_50
Genomic location 121927 - 123258 (- strand)

Cross-References

RefSeq WP_020289775.1
GI 520785738
INSDC EPJ87907.1
NCBI Locus Tag CFII64_05560
UniParc UPI00035831AC
UniProtKB Acc S6HG85
UniProtKB ID S6HG85_9PSED
UniRef100 UniRef100_S6HG85
UniRef50 UniRef50_P32722
UniRef90 UniRef90_S6HG85

Product

Feature Type CDS
Coding Frame 1
Product Name
Basic amino acid, basic peptide and imipenem outer membrane porin OprD precursor
Synonyms
Evidence for Translation
Charge (pH 7) -16.32
Kyte-Doolittle Hydrophobicity Value -0.319
Molecular Weight (kDa) 47.5
Isoelectric Point (pI) 4.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000187 (1579 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: CFII64_05560

Human Homologs

References

No references are associated with this feature.