Pseudomonas chlororaphis YL-1, P637_RS0116020

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00605
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13442
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13442
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 210 313 2.6E-26
Gene3D G3DSA:6.10.280.130 - IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily 1 94 6.8E-38
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 213 303 4.36E-21
PIRSF PIRSF000006 Cbb3-Cox_fixP IPR004678 Cytochrome c oxidase cbb3-type, subunit III 1 305 2.3E-100
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 131 205 5.3E-14
FunFam G3DSA:1.10.760.10:FF:000015 Cbb3-type cytochrome c oxidase subunit - - 211 308 9.1E-44
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 95 209 3.7E-33
FunFam G3DSA:1.10.760.10:FF:000013 Cbb3-type cytochrome c oxidase subunit - - 95 210 2.2E-55
NCBIfam TIGR00782 JCVI: cytochrome-c oxidase, cbb3-type subunit III IPR004678 Cytochrome c oxidase cbb3-type, subunit III 31 303 1.6E-79
PRINTS PR00605 Class IC cytochrome C signature IPR008168 Cytochrome c, class IC 141 152 2.5E-6
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 55 208 2.47E-31
Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal 37 83 2.4E-22
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 221 298 7.2E-10
PRINTS PR00605 Class IC cytochrome C signature IPR008168 Cytochrome c, class IC 183 205 2.5E-6
PANTHER PTHR33751 CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT FIXP - - 42 302 9.6E-57

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.