Pseudomonas sp. TKP, U771_28915
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. TKP, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TAAGCGTCACGCCAAGAAAGTTCAGCGCGAACAGCGCCGCGCCGTTCGTCTGTACTAATACACAGACGTTCGTAGCAAGCTTCTGCCAAGCCCGGCCCTC AGCCGGGCTGTTGGCATTTGCGGATATCGCTTGATGCTTCATCGTCGACGCCGCCCATGCGACAGAGACACCGCTTCACACGTCAGGACTGGCTTTTCTG CCAGCGGTGCACGTCTCTTCTGACGAGCCTAACAAGGCTACTGACGAGCACACTTATTTTCAGGCAGGCGATCAACAGGTCGACTGTGCCCAACGATGAG CTTCCGAGGCCCTCTATTGGCCAAGACCGGATGCCAGGGCAGCCTTTACACGCCGGACACTGATTGAAATTAACGTCAGTGAACGTTCGGCAGATACACT TCCATACAGCCCAAGCAGACGATTGATGGTCGAGCCACTCGATACGTACGCCTGAGCACTTCACGGGCCCTCAATTACACGCAGTGATGACGAGAACGCC
|
|
| DNA Sequence for Gene |
>U771_28915
ATGGCCGGGCTGATTCCCCAGAGCTTTATTGACGACCTTCTGAACCGCACCGACATCGTCGATGTTGTCAGCTCGCGCCTGCAAATGAAGAAGGCAGGCA AGAACTACACCGCCTGCTGCCCGTTCCACAAGGAAAAGACCCCTTCGTTCAGCGTCAGCCCCGACAAGCAGTTCTATTACTGCTTCGGTTGCGGCGCGGG CGGCAATGCCCTCGGCTTTATCATGGACCACGACAACCTGGACTTCCCCCAGGCCGTCGAGGAACTGGCCAAAGCCGCCGGCATGGAAATCCCTCGCGAA GAAAGTGGCCGACCGCACAAACCGCGGCAACCCACTGACTCGCCGCTATACCCACTGCTGACCGCCGCTGCGGACTTTTATCGCCAGGCGCTCAAGAGCC ATCCGCAGCGCAAGGCCGCCGTCGATTACCTCAAGGGCCGTGGCCTTACCGGTGAAATCGCCCGCGACTTCGGTCTCGGCTTCGCCCCGCCGGGCTGGGA CAACCTGTACAAACATTTGAGCAGCGACACCCTGCAGCAAAAAGCCATGATCGACGCCGGCCTGCTGGTGGAAAACGCCGAGACCGGCAAGCGCTACGAC CGTTTCCGCGACCGCGTGATGTTTCCGATCCGCGATAGCCGCGGCCGGATCATCGCCTTCGGTGGTCGCGTGCTCGGCGACGACAAGCCCAAGTACCTGA ACTCCCCGGAAACCCCGGTGTTCCACAAGGGACAGGAACTCTACGGCCTGTTCGAGGCGCGCAAGAACAATCGCAACCTCGATGAAATCATCGTGGTTGA AGGCTATATGGATGTGATCGCCCTGGCCCAGCAAGGTTTGCGCAACGCCGTGGCCACCCTCGGCACAGCCACCAGCGAAGAGCACATGAAACGCCTGTTT CGCGTAGTGCCCAGCGTTTTGTTCTGCTTCGACGGCGACCAGGCTGGTCGCAATGCCGCCTGGCGCGCCCTCGAAGCCACGCTGTCGAGCCTGCAGGATG GTCGCCGCGCACGCTTTCTGTTCCTGCCCGAAGGCGAAGACCCGGACACCCTGGTCCGCTCCGAAGGCACCGACGCCTTTCGCGCACGCATCAATCAACA CGCGCAGCCGCTGGCGGATTATTTCTTCCAGCAACTGACTGAAGAAGCCGACCCGCGCTCTCTCGAAGGCAAGGCCCACATGGCCACCCTTGCGGCGCCA CTGATCGACAAGGTTCCAGGCGCCAACCTGCGCACCCTGATGCGTCAACGCCTGCTGGAAATCACCGGCTTGAGCGGCGAAGCGGTCAGCCAGCTGGTGC ACAGCGCACCACAGGACGCACCGCCCGCCCACGACCCTGGCATGGACTACGACGCCATGCCGGACTATTCCGACTTCCACCAACCGCAGGAGGCGTATGC GCCCCAGCAGGAGTGGACGCCGAAGAAACCCGGCGCCGGCGGCAAAAAATGGGACAAGAAACCGTGGAGCAAGAACGGCAAGCGCGGTGATCGCGACGAG CCCTATGCCCCCCGTACACCGGTAGCCGTGGAAGCCCCGACGCTCATTGCATTGCGCACGTTGATTCATCACCCGCAATTAGCGGGCAAGGTCGAAAGCG CCGAGCATTTTGCCAACGAAAGCAATACCTACGCCCAGGTGCTGATTGCCCTGATCGAGGCAGTGCAGAAAAATCCTAAGCTAAACTCTATTCAGCTGAT GGCTCGTTGGCATGGCACCGAACAAGGTCGCTTGCTCAAGGCACTCGCGGAAAAGGAGTGGCTAATTGACGGCGACAACCTTGAACAACAGTTTTTAGAC ACCATTACTAGGTTATCCGAGGGCCAGCACACGCAGACCCTCGATGAACTCATCAAGAGAGCAAGGCAGCCGGGATTGTCGGCTGAAGAGCAAATTCAGA TAGCAAAACAGATGCGCGACCTCTTAAAACAGAATGTTTCCGCATCAAACCCGACCTCAGCTGGCGTGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGTCATAGCTCGGGTATAATCCTCGGCTTGTTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAGTCTCGTATC AAAGAGTTGATCACCCTTGGTCGTGAGCAGAAGTATCTGACTTACGCAGAGGTCAACGATCACCTGCCTGAGGATATTTCAGATCCAGAGCAGGTGGAAG ACATCATCCGCATGATTAATGACATGGGGATCCCCGTACACGAGAGTGCTCCGGATGCGGACGCCCTTATGTTGGCCGACGCCGATACCGACGAGGCAGC CGCTGAAGAAGCCGCTGCCGCGTTGGCCGCGGTGGAGACCGACATCGGTCGCACGACTGACCCTGTGCGCATGTATATGCGTGAAATGGGTACCGTCGAG TTGCTGACACGCGAAGGCGAAATCGAAATCGCCAAGCGTATTGAAGAGGGTATCCGTGAAGTGATGGGCGCAATCGCGCACTTCCCTGGCACGGTTGACC
|
|
| Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLLNRTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGCGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPRE ESGRPHKPRQPTDSPLYPLLTAAADFYRQALKSHPQRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQKAMIDAGLLVENAETGKRYD RFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLFEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLF RVVPSVLFCFDGDQAGRNAAWRALEATLSSLQDGRRARFLFLPEGEDPDTLVRSEGTDAFRARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAP LIDKVPGANLRTLMRQRLLEITGLSGEAVSQLVHSAPQDAPPAHDPGMDYDAMPDYSDFHQPQEAYAPQQEWTPKKPGAGGKKWDKKPWSKNGKRGDRDE PYAPRTPVAVEAPTLIALRTLIHHPQLAGKVESAEHFANESNTYAQVLIALIEAVQKNPKLNSIQLMARWHGTEQGRLLKALAEKEWLIDGDNLEQQFLD TITRLSEGQHTQTLDELIKRARQPGLSAEEQIQIAKQMRDLLKQNVSASNPTSAGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|