Pseudomonas aeruginosa MTB-1, U769_12000
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa MTB-1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGACCAGCACGGCTTCGTGCGTCGCTACTCGACCCAGGGACGCGACGACACCAGCCTGCGCCTGAAAGTCGAAACCCTCGACTGACCGACGGCGCTCT TTCCAGCGCGAATTGCCTCCCGCTCCGGCAAAGCCGCGGGGGCGCGGGCTTTTGCGGGCATTTTCGATGCAAACGGAAACATCTCGACCATACAAGACCA TCCGGTCACTCTTAGACCTTCGTGTAGTAGTCTTGAAAAAACACTACAAAACGTTTGACGACGGATTTTTTCCAGAGCATGATGGCCCCGCTCCCGCTAA TCAGGGGCTCTGAAACGACGAGCTCCCGGTGCCTGCGCCGATACGCCCTCGGCCTCCACCGTGTTGATCTGCCCACAAGGCGGCTTGACGAGATTGCGAC TGGAACGAAGTTGTCCTGAGGGACGGGGAAGCGTTTACGTCAGCCAGATCGAAAGACTCGACAGCGAGTCGCCCACCGGCAACCACGAGCCGAACGGCAC
|
|
| DNA Sequence for Gene |
>U769_12000
TTGATCCAGTCGAGAAGCACGGTCCGCGAACTGTTCGTCTCCACCCCCTCCTCGGCGTCATTCTTCGCCACGGTCATTCTCTCGCCATGCAGCGGTGAGC CACCCGCAAGACAACCTTCACCAGCAGGTTTTGAGTGGGTCAGTCGGTGCTCAACCAATACATTTCTTGAAGGATTGACCATGTCCGCATATCAGAACGA GATCAAGGCAGTTGCCGCGCTGAAAGAGAAGAACGGCAGCAGCTGGAGCGCGATCAACCCCGAGTACGCAGCTCGCATGCGTATCCAGAACCGCTTCAAG ACCGGCCTGGATATCGCCAAGTACACCGCGGCCATCATGCGCAAGGACATGGCCGAATACGATGCGGACTCCTCCGTCTACACCCAGTCGCTGGGTTGCT GGCACGGCTTCATCGGGCAGCAGAAGCTGATCTCGATCAAGAAGCACCTGAAGACCACCAACAAGCGCTACCTCTACCTGTCCGGTTGGATGGTCGCCGC GCTGCGCTCCGACTTCGGCCCGCTGCCGGACCAGTCCATGCACGAGAAAACCGCGGTTTCCGGCCTGATCGAAGAGCTGTACACCTTCCTGCGCCAGGCT GACGCCCGCGAGTTGGACCTGCTGTTCACCGGCCTGGACGCTGCCCGCGCCGCTGGCGACAAGGCCAAGGAAGCTGAGCTGCTGGCCCAGATCGACAACT TCGAAACCCACGTGGTGCCGATCATCGCCGACATCGACGCCGGCTTCGGCAACGCCGAGGCGACCTACCTGCTGGCCAAGAAGATGATCGAAGCCGGCGC CTGCTGCATCCAGATCGAGAACCAGGTGTCCGACGAGAAGCAGTGCGGCCACCAGGACGGCAAGGTCACCGTTCCGCACATCGACTTCCTCGCCAAGATC AATGCCGTACGCTACGCCTTCCTCGAGCTGGGCGTGGACGATGGCGTGATCGTCGCCCGCACCGACTCCCTGGGCGCCGGCCTGACCAAGCAGATCGCCG TGACCAACGAGCCGGGCGACCTGGGCGACCTGTACAACTCCTTCCTGGATTGCGAAGAGATCTCCGAGGCCGAGCTGGGCAACGGCGACGTCGTGATCAA GCGCGAAGGCAAGCTGCTGCGTCCGAAGCGCCTGGCTTCCAACCTGTTCCAGTTCCGCAAGGGCACCGGCGAAGATCGCTGCGTCCTGGACTGCATCACC TCGCTGCAGAACGGCGCCGACCTGCTCTGGATCGAAACCGAGAAGCCGCACGTCGGCCAAATCAAGGCAATGGTCGATCGCATCCGCGAAGTGATTCCGA ACGCCAAGCTGGTCTACAACAACAGCCCGTCCTTCAACTGGACCCTGAACTTCCGCCAGCAGGTGTTCGATGCGTTCGTCGCCGAAGGCAAGGACGTTTC CGCCTACGACCGCAACAAGCTGATGAGCGTCGAGTACGACGACACCGAGCTGGCCAAGGTCGCCGACGAGAAGATCCGCACCTTCCAGCGCGATGGCTCG GCCCACGCCGGCATCTTCCACCACCTGATCACCCTGCCGACCTACCACACCGCCGCGCTGTCCACCGACAACCTGGCCAAGGGCTACTTCGCCGACGAAG GCATGCTGGCCTACGTGAAGGGCGTGCAGCGCCAGGAACTGCGCCAGGGCATCGCCTGCGTCAAGCACCAGAACATGGCGGGCTCCGACATCGGCGACAA CCATAAAGAGTACTTCGCAGGCGAAGCCGCTCTGAAGGCCAGCGGCAAAGACAACACCATGAACCAGTTCCACTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGAACAGGGGCCAGCCGGGCAGCCACGATCTGCCCGGCCCGCCTCGCGAAAACCCCGGCTCCGGCCGGGGTTTTTCATTTCCGGATCATGGCAAAAGGCC TCGAGTGCCTGTCATCGTCCCGTCGCTTTCAGCGGTTAGCGTCAATGCTCCGTCGATCAGCCCACAAGGAGCACGTCCGTGAGCCTGGAGAAAAAAGATG CCATCCTGTTCGGTGATGGCGACGAGTTGCCCAGCAACCATTCGAACAACCCGCACATGAACGACCTGATCGCCGGCCTCGGCCGCCGCCAGGTCCTGGC CGGCGGCGCGGCGCTCGGCGCCCTCGCCTTCCTCGGCGTCGCGCTCCCCGCCAGCGCCGCCCCCGCCGAAGCGCAGGCGCCCGCCGCGGAAGGCCTGCGC GGCTTGCCTTTCAAACGCCGCAACCGCTTACCCTTCGAAGCCATCGCCAGCGGCCGCGCCGATACCATCCGGGTGCCCGCCGGCTACAAGGCGACGCCCT
|
|
| Amino Acid Sequence |
>isocitrate lyase
MIQSRSTVRELFVSTPSSASFFATVILSPCSGEPPARQPSPAGFEWVSRCSTNTFLEGLTMSAYQNEIKAVAALKEKNGSSWSAINPEYAARMRIQNRFK TGLDIAKYTAAIMRKDMAEYDADSSVYTQSLGCWHGFIGQQKLISIKKHLKTTNKRYLYLSGWMVAALRSDFGPLPDQSMHEKTAVSGLIEELYTFLRQA DARELDLLFTGLDAARAAGDKAKEAELLAQIDNFETHVVPIIADIDAGFGNAEATYLLAKKMIEAGACCIQIENQVSDEKQCGHQDGKVTVPHIDFLAKI NAVRYAFLELGVDDGVIVARTDSLGAGLTKQIAVTNEPGDLGDLYNSFLDCEEISEAELGNGDVVIKREGKLLRPKRLASNLFQFRKGTGEDRCVLDCIT SLQNGADLLWIETEKPHVGQIKAMVDRIREVIPNAKLVYNNSPSFNWTLNFRQQVFDAFVAEGKDVSAYDRNKLMSVEYDDTELAKVADEKIRTFQRDGS AHAGIFHHLITLPTYHTAALSTDNLAKGYFADEGMLAYVKGVQRQELRQGIACVKHQNMAGSDIGDNHKEYFAGEAALKASGKDNTMNQFH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|