Pseudomonas putida H8234, L483_30095

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00088
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pput02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pput02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1527 1643 7.97E-37
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 16 108 1.2E-7
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1435 1495 1.0E-17
MobiDBLite mobidb-lite consensus disorder prediction - - 863 886 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 888 1005 2.88E-27
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 922 985 5.83284E-8
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1265 1279 1.4E-11
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 23 135 2.88E-18
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1345 1358 1.4E-11
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1366 1497 8.2E-20
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 576 660 1.79094E-7
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 575 695 4.58E-20
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 441 528 3.1E-14
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1175 1360 4.1E-53
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 441 566 0.0
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1220 1361 2.9E-24
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 576 670 7.7E-12
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 714 836 5.49E-15
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 439 570 7.4E-28
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 22 138 9.7E-10
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 708 839 3.9E-12
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1177 1358 2.89E-36
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 295 408 1.91E-10
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 887 984 8.3E-9
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1527 1638 7.78194E-33
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 438 562 6.93E-27
Coils Coil Coil - - 1069 1096 -
CDD cd16916 HATPase_CheA-like - - 1183 1358 4.42023E-79
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1038 1175 1.2E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 887 1017 2.6E-29
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1525 1638 2.4E-35
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 574 676 0.05
Coils Coil Coil - - 1141 1161 -
Gene3D G3DSA:3.40.50.2300 - - - 1527 1646 1.3E-41
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1527 1638 1.1E-27
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 575 705 8.7E-17
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 439 536 0.0038
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1321 1339 1.4E-11
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1176 1360 2.5E-62
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 889 981 1.5E-16
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 439 528 7.31486E-10
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1360 1493 7.59E-22
SMART SM00260 chew_2 IPR002545 CheW-like domain 1353 1497 4.7E-22
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1224 1360 4.7E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.