Strain | Pseudomonas aeruginosa BWHPSA002 genomic scaffold adgeG-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGCCGTAGGCGCGGGTGATCTCGTGCTTGACGTCGGCGACCATGGTGAACTCGACCGCACCGATGCCGCCCTTCTCCACCGGCGTGCTGCGCCAGGCGTG ATGGGTGAACTGCGAGTCGATGGAGACACCGACCACCTCGACGCCCAGCTCGCGGAACTTATCCATGCGGTTGTTGTGGGCGATGATTTCCGAGGGGCAG ACGAAAGTGAAGTCGAGCGGCCAGAAGAACAGTACGACGTACTTGCCGCGCAGGCTGGAAAGCTGGAAGGCATCGACGATGGAACCGTCGCCGAGGACCG CGGCGGCAGTGAAATCGGGGGCTTGCTTGTTGACCAGTACGCTCATCGCGAGGCTCCTAGAAGGTTGGGTTGCGCCCGGCGACGCCAGGCTCCCGGAAGA ATATGCAGCGCAGGTTACCCAGCCACGACGATGCATTGAAATGTCGAATTTCAATTCGCACGATAGAGTCAGCCTATGCTCTCAACCTGCGGCTAGACTC
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DNA Sequence for Gene |
>Q015_03660
ATGCTGTCGCCCATTACCCGTCCTCACCGCATGCCCCTACGCACACGCCTGCTCTGGCTGTTCCTGCCGTTGCTGGCCGCCAGTCTCGGCGGTATCTGGC TCTTGTCGGAAAGCATCCTGCTGAGCCGTTTCGACCGAGAGGACCAGCAACGCCTGCAAGAGGGCGCCACCGTCCTGCACAACCGGCTGGACTTCGAGTT GAAGCGCCACCTGGACATCGTTCGCACCTACGCCTGGTGGGATGCCAGCTACGACTTCATCCAGCGCCCCAACGAGACCTTCGAACAGGAAAACCTCGAC CACGAGATGCTCGACGACCTGGGATTCGACTTCGTCCTGTTCCTCGACGACCGGGGTCACCTGCAACTGAAGCAGTGGTCCCCGCCCGCGCCCGACCAGC GCGTGCTCTTCGGCGCCCCCTCGGCGAGCGACCAGGCCCTGCTCGAGGCACTGCAGCAACGCGCCATCCGCCTCGGCGCGCTGGACTTTCGCGGACGCAC CGACCACAGCCTGAGCGAGCTGCTGCTGGTCGACAACCTGCCGACCCTGCTGGTCAGCGTGCCTATCAGCAACAACCAGGGTAGCGCGCCGGCGAAGGGC GCGATCCTCGCCGGCTACTTCCTCGACCGGGAACGCCTGGCCAACCTCCGCGAACAGATGCAGGCCGACCTGCAACCGATGCCCAACATCGCCACCGACT CCACCTGGAAGCCGCTGCGCAGCCGCAGCGGCAGTACCCACAACCAGGCCCTGCTCAGCCCACGGCGGTTCATCGGCGAACATGTCCAGCAGGTCTCGGT GCAGTACCTGAGTTCCAGCGGCGAGCCGCAGCTGCGCTTCGACATCACCAAGAAACGCCTGCTCTACATCCAGGGCGAGAAGGCCATCAACTTCTTCCTC GGCGCCTCCCTGCTGGTCGCGCTGGGCGCTTTCCTGGTCGGCTACCTGGCCCTGGAGCTGTGGGTCCTGCGCCGGGTCCAACGGCTCAACCGGGAGGTCG CCGAAGTCGGACGCAACGCCCACTCGATACGCCTGAGCGACTTCGGCAACGACGAGCTGGGACAACTGGCGGGCGAGATGAACCAGATGCTCGAGCGCCT GGAACACAGCGAGGCGCGCGACCGGGCGATCCTCCAGTCGATGCGCGACGGCTACTTCGAAATGGACGTCGACGGCGTGATCCTCACCGTCAACCCCGCG CTCTGCCAACTGCTCGGCCAGACGCGCGAAACGCTGATCGGCCATCCCTACTACGAACTGCTCGGCGAAGACGACCTGGCGCGTGCCCGCCAACCCTTCC AGCGCGCCATGCAGAGCGGCGCAGGCAAGACCTTCGCCATCCCCCTGCAGCGCGCCGACGGCAGCCTCGGCTACTTCGAGGCCACGGTTTCGCTGATCCA CGACCTGCAGGGCGAACTACGGGGCTACCGCGGCATCGTCCGCGACGTCAGCGACCAGATCGCCTACCAGCAGCAATTGCTGGAAATGGCCTACCGCGAC CCGCTGACCGGCCTGGGCAACCGCAAGGCCTTCGACGAACAGCTCGGCCAGGCGTTGCTTCGCGCCGGCTCCGGCGGAAGCGAACTGGCGCTGCTGTACC TGGACCTGGACCGCTTCAAGGAGGTCAACGACCGCTTCGGCCACGACATCGGCGATGCCCTCCTCAGGACCGTCGCCGAACGGGTACGCAGCACCCTGCG GCAGCCGGACAAGGCCTACCGCCTGGGCGGCGACGAATTCGCCGTGCTCCTCGAGGACAGCCAGGAAAACAATCCGCAGCGCCTCGCAGAACGCCTGCTG GCGGCGCTGGTCCAACCGATCGCGCTGAATGGCGAACGCATCGACTTCGTCACCCCGAGCATCGGCATCGCTCTCTACCCGCGGCATGCCGGCGATGCCG AAGGACTGGTCCGTGCCGCCGACAGCGCCATGTACGAGGCCAAGCGCCAGCGCAACCACTATTGCCTGTACCAGGCGCCAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AATGCGCGGTCAAACAGGCTCTGTCGCGGGCTTTCGCCAGTCTGCTAAGGTTTCAGCCCGCATCCCATCGGAGAACCATTCCCTATGCCAGCCCTGAGCG GCCCGCAATACCTCGGCGAAGGCCTGAAGCTGATCATGCGTCCCGGCCTGCGCCTGTTCGTGCTGATCCCCCTGACCCTCAACCTGCTGGTGTTCGCCCT GCTGATCGGCTTCGCGATGCAGCAGTTCAGCCACTGGGTCGACCTGCTGATGCCCAGCCTGCCCGACTGGCTGAGCTTCCTGCAGTACATCGTCTGGCTG TTGTTCGTCCTGCTGGTGCTGGTGATCGTGTTCTTCACCTTCACCATGGTCGCCAACATCATCTCCGCGCCGTTCAACGGCTTCCTCTCGGAAAAGGTCG AGGTGGTGGTTCGCGGCCGCGACGACTTCCCGCCGTTCAGCTGGGCCGAACTGCTGGCGATGATCCCGCGCACCATGGGTCGCGAGATGCGCAAGCTCGC
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Amino Acid Sequence |
>diguanylate cyclase (GGDEF) domain-containing protein
MLSPITRPHRMPLRTRLLWLFLPLLAASLGGIWLLSESILLSRFDREDQQRLQEGATVLHNRLDFELKRHLDIVRTYAWWDASYDFIQRPNETFEQENLD HEMLDDLGFDFVLFLDDRGHLQLKQWSPPAPDQRVLFGAPSASDQALLEALQQRAIRLGALDFRGRTDHSLSELLLVDNLPTLLVSVPISNNQGSAPAKG AILAGYFLDRERLANLREQMQADLQPMPNIATDSTWKPLRSRSGSTHNQALLSPRRFIGEHVQQVSVQYLSSSGEPQLRFDITKKRLLYIQGEKAINFFL GASLLVALGAFLVGYLALELWVLRRVQRLNREVAEVGRNAHSIRLSDFGNDELGQLAGEMNQMLERLEHSEARDRAILQSMRDGYFEMDVDGVILTVNPA LCQLLGQTRETLIGHPYYELLGEDDLARARQPFQRAMQSGAGKTFAIPLQRADGSLGYFEATVSLIHDLQGELRGYRGIVRDVSDQIAYQQQLLEMAYRD PLTGLGNRKAFDEQLGQALLRAGSGGSELALLYLDLDRFKEVNDRFGHDIGDALLRTVAERVRSTLRQPDKAYRLGGDEFAVLLEDSQENNPQRLAERLL AALVQPIALNGERIDFVTPSIGIALYPRHAGDAEGLVRAADSAMYEAKRQRNHYCLYQAPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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