Pseudomonas aeruginosa PAO1, PA5076

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016597 amino acid binding
ISS
Inferred from Sequence or Structural Similarity 		ECO:0007090
31631799 Reviewed by curator
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015276 ligand-gated ion channel activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00079
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00079 GluR_14 IPR001320 Ionotropic glutamate receptor, C-terminal 35 258 1.6E-5
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 35 259 2.2E-57
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 36 257 1.4E-57
Gene3D G3DSA:3.40.190.10 - - - 122 217 3.5E-66
Gene3D G3DSA:3.40.190.10 - - - 32 254 3.5E-66
PANTHER PTHR35936 MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE F - - 5 262 3.0E-52
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 1 258 1.71E-67
CDD cd13629 PBP2_Dsm1740 - - 35 256 1.26525E-121

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.