Pseudomonas aeruginosa PAO1, PA5076
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCCATCGAGACGGTGCGTGGCGAGCGTATCGGCAAGGCCATCGATAAGGGCCCGGAACAGCTCGACGGCGCCACGCGCCTGGCTCTGTTGAGTGACCC GGTAGCACTTTCGCGCCTGCATACGCGGGTCTGGGAAGAGGACCGCGACGACTGGCTCGGCCGCTGGCGCAAGGCCGAGGCGGACGACCCCCACGCCGCC AGCGTACCGCTGGCCCAGGTAGTGCCCGGCGACGCCGGCCTGCTGCCCGCCGCCCAGTCCTGATCCCATGCCCCCGGCGGAACGCCGCCGGGGGCATGGT CTGTTTCTTGCCTGTTTTCCCCGTGCGGCGCTGCTGTTACCCTGCGCCGGCAATCCAGAAAGTCTCGTATCGTTCGCCAGCTGAGGTACTATCGGCCGCC TTTTGCGCAGCCGGTCATGGCCTGCTGCCCGCCCGGGACGGCGACACGACGAGAGCATCCGTTCGACGACTGTGTTTCTAAGACTGCTGGGGATTGGGGA
|
|
| DNA Sequence for Gene |
>PA5076
ATGAAAAAGTATCTTGCTTCATTGGTTCTGGGCGTCTGCGCCCTGGTGGGCGTGGCTTCGGTCCAGGCGGCCGGCGCGGTGGAGGACGCGGTCAAGCGCG GCACCCTGCGGGTCGGCATGGACCCGACCTACATGCCGTTCGAGATGACCAACAAGCGTGGCCAGATCATCGGCTTCGAAGTCGACCTGCTCAAGGCCAT GGCCAAGTCCATGGGCGTCAAGCTGGAGCTGGTCTCCACCAGCTACGACGGCATCATCCCGGCGCTGCTGACCGACAAGTTCGACATGATCGGCTCGGGC ATGACCCTGACCCAGGAGCGCAACCTGCGCCTGAACTTCTCCGAGCCCTTCATCGTGGTCGGCCAGACCCTGCTGGTGCGCAAGGAACTGGAAGGCAAGA TCAAGTCCTACAAGGACCTGAACGATCCGCAGTACAGCATCACCTCGAAGATCGGCACCACCGGTGAGATCGTTGCCCGCAAGCTGATCAGCAAGGCCAA GTACCACGGCTTCGACAACGAGCCGGAAGCGGTGATGGACGTGGTCAACGGCAAGGCCGACGCCTTCATCTACGACTCGCCCTACAACGTGGTGGCGGTG AGCAAGTTCGGCGCCGGCAAGCTGGTCTACCTCGACCAGCCGTTCACCTACGAGCCGCTGGCGTTCGGCCTGAAGAAAGGCGACTACGACAGCATCAATT TCATCAACAACTTCCTCCATCAGATCCGCGAAGACGGCACCTATCAGCGCATCCACGACAAGTGGTTCAAGAACACCGAGTGGCTGAAGGAAATGGAATG A
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACCGCTGACGGCCCCCGCGAAGGGGGCCGTCGTACCTGCGCATTCCATCGTTCGAGAGAGTTTCCGTGACCAAGAAGAAACGTTCCGTCTGGCCCTGGCA CCTGCTGACCGGGCTGATCCTGCTGGTCCTGGCCTGGGCGCTGTGGTTCTCCACCTCGCTGATTTCCTATGAATGGCGCTGGAACCGCGTTCCGCAGTAC TTCGCCTACCAGGCCGAGGAGCCGTTACGGGCCAACGAGATCGGCCGGGTCGAGGCTATCGAGGAACAGGGCAGGGACGCGCGCGTCACGCTGCTTGGCG AGAGCGGCGAGAAGCAGGTCGTGACCGTTGCCCAGGACAGCCTGCAATTCTCCGAAGGCGACGACGTGGCCGAGGGCGACGCGGTCGGGGTGACCCGCCA CTGGGCCGCCGGCCCACTGCTCTGGGGCCTGTGGACCACCCTCTGGCTATCGCTGGTGTCCGGTGCCATCGGTCTGGCTATCGGCCTGGTCGCCGGCCTC
|
|
| Amino Acid Sequence |
>putative amino acid ABC transporter substrate-binding protein
MKKYLASLVLGVCALVGVASVQAAGAVEDAVKRGTLRVGMDPTYMPFEMTNKRGQIIGFEVDLLKAMAKSMGVKLELVSTSYDGIIPALLTDKFDMIGSG MTLTQERNLRLNFSEPFIVVGQTLLVRKELEGKIKSYKDLNDPQYSITSKIGTTGEIVARKLISKAKYHGFDNEPEAVMDVVNGKADAFIYDSPYNVVAV SKFGAGKLVYLDQPFTYEPLAFGLKKGDYDSINFINNFLHQIREDGTYQRIHDKWFKNTEWLKEME
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|