Strain | Pseudomonas aeruginosa BWHPSA015 genomic scaffold adggh-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGGAAGAGTGACGCCGGCATGCGGTTGCGCCTGATCGCGGTTGGCTCGCGCATGCCTCGCTGGGTCGAGGAAGGCTGGCAGGAATACGTCAAGCGCCT GCCGGCCGAGCTGTCCCTCGAACTGGTGGAGATCCCGCTCAACACCCGCGGCAAGAACGCCGACGTGGCGCGCCTGATCCGTCAGGAAGGCGAGGCCATG CTGGCGCGCGTGCAGCCGGGGGAACGGGTGGTGACCCTGGAGGTCGAAGGTCGGCCCTGGAGCACCGAGCAACTGGCTCGCGAACTGGATCGCTGGCGTC TCGACGCACGCACCGTGAATCTCATGGTCGGCGGCCCGGAAGGGCTGGCGCCGGAGGTCTGCGCGCGCAGCGAGCAGCGCTGGTCGCTGTCGCCGTTGAC GCTGCCGCACCCGTTGGTGCGGATCCTGGTCGGCGAGCAGATCTACCGGGCCTGGACCGTATTGTCCGGGCACCCCTACCACAAATAGTCCCCAGTCCCG
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DNA Sequence for Gene |
>Q028_02214
ATGCCGCAGCCGATCCACCTGAAAGACCACGAGAAAGACGCCCGCCTGGTGCGTCGGCGCGTCATCGTCGGGGCGGTGGCGGTGGTCTTGCTGACCCTGG TGCTGGTGGCGCGCATGTACCACCTGCAGGTGACCCAGTACGAGTACCATTCGACGCTGTCGGAGAACAACCGGGTCCATGTGCAGCCGATCCCGCCGAC CCGCGGGATCATCTTCGACCGCAACGGCGTGATCATCGCCGACAACCGACCGAGCTTCAGCCTGACCATCACCCGCGAACGCACCGAGGACCTGCAGAAG ACCCTCGACACGCTGGTGGAGATCCTCGGCCTGACCGAGGACGACCGGGCCATCTTCGAGAAGCGCATGAAGCAGGGGCGGCGTCCGTTCGAGCCGGTTC CCATCATGTTCGAACTCAACGAGGAACAGATCGCCCGCATCGCGGTGAACCAGTTCCGCCTGCCGGGCGTCGACGTGGCGACCCAGTTCGTCCGCCACTA CCCGCTGAAGGAGCACTTCGCCCATTCGGTCGGGTACGTCGGGCGGATCAACGAGCAGGAACTGAAGAACCTCGACCCGATCAACTACAGCGGCACCCAC CATATCGGCAAGACCGGCATCGAGCGCTTCTACGAGAGCGAGCTGCATGGCACGGTTGGCTACGAGGAAGTCGAGACCAACGCCCGCGGGCGGGTGCTGC GGGTGCTCAAGCGCACCGACCCGATTCCCGGCAAGGACATCGTCCTGAGCATCGACAGCCGCCTGCAGGAGGCCGCCGAGAACGCCCTGGCCGGGCGGCG GGGCGCCATCGTGGCGATCCAGCCGTCCACCGGCGACGTGCTGGCGATGGTCAGCCAGCCGAGCTACGACCCCAACCTGTTCGTCACCGGCATCAGCTTC AAGGCCTATGCCGAGCTGCGCGACTCCATCGACCGGCCGCTGTACAACCGCGTCCTGCGCGGGCTCTATCCGCCGGGCTCGACGGTGAAGCCGGCGGTGG CGCTGGCCGGCCTCGACGCCGGGGTGGTCACGCCGACCTCGCGGGTCTTCGACCCCGGCTACTACCAGTTGCCCAACTACGACCACAAGTACCGTAACTG GAACCGCTACGGCGATGGCTGGGTGAGCCTGGAGTCGGCGATCTACCGGTCCAACGACACCTATTTCTACGACCTCGCGCACAAGCTGGGGATCGACCGC CTGCACGCCTTCATGAGCCGCTTCGGCTTCGGCCAGAAAGTCGCCCTGGACATGTTCGGCGAAGCCGACGGGCTGATGCCCTCGCGCGAATGGAAGCGCA AGACCCGCCGCCAGGTCTGGTACCCGGGCGAGACCCTGATCCTCGGCATCGGCCAGGGCTACATGCAGGCGACGCCGATCCAACTGGCGCAGATGACCGC GCTGCTGGCCAACAAGGGCCACTGGATCCGCCCGCACCTGGCCAAGACCATCGACGGCCAGCCGCCGGTCGATCCCGACCCGATGCCCGACATCGTGCTG CGCGACCCGGCCAACTGGGACCGCGTCGACTACGGCATGCAGCAGGTGGTGCATGGCGCCCGCGGCACGGCGCGCAAGGTCGGCGCCACCTCGGCCTACC TGATCGCCGGCAAGAGCGGTACCGCCCAGGTGGTGGCGATCAAGCAGAACGAGCGCTACGACCGCTCCAAGCTGCTCGAGCGGCACCGCGACCACGCCCT GTTCGTCGGCTTCGCGCCGGCCAACAACCCGCAGATCGCGGTGGCGGTGATGGTGGAGAACGGCGAGTCCGGCTCCGGCGTCGCCGCCCCGGTGGTCAAG CAGGTGATGGACGCCTGGCTGCTCGACGAGCACGGCAAGCTCAAGGCCGAATACGCGGAACCCGTCGCGCCGCTCGCGGCGGCGGTGGCCAAGCCCGAAC CCACGGCAGCCGAGCCGGAGGCGCCCGCCCTTGAACAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTTCGACCGCACCCTGTCCAACGAAGACGTGATGCGCCGGCGCGCCAGCCTGTTGCAGCGCCTGCACATCGACGGGATTCTCCTGCTGCTGTTGCTGATC CTCGGCGCCACCGGCCTGTTCGTCCTCTATTCGGCGAGCGGCAAGAGCTGGGACATGCTGATGAAGCAGGCCACCTCGTTCGGCCTGGGACTGGGCATGA TGGTGGTCATCGCCCAGATCGAGCCGCGCTTCATGGCCCGCTGGGTGCCGCTGGGCTACCTGGTGGGGGTCGCGCTGCTGGTGGTGGTCGACGTGATCGG CCACGACGCCAAGGGGGCGACGCGCTGGATCAACATCCCCGGGGTGATCCGCTTCCAGCCCTCGGAGTTCATGAAGCTGCTGATGCCGATGACGGTGGCC TGGTACCTGTCCAAGCGCAACCTGCCGCCGGGGCTCAAGCACATGGTGATCAGCCTGGCGATCATCATCACCCCGTTCGTGCTGATCCTGAAACAACCCG
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Amino Acid Sequence |
>penicillin-binding protein 2
MPQPIHLKDHEKDARLVRRRVIVGAVAVVLLTLVLVARMYHLQVTQYEYHSTLSENNRVHVQPIPPTRGIIFDRNGVIIADNRPSFSLTITRERTEDLQK TLDTLVEILGLTEDDRAIFEKRMKQGRRPFEPVPIMFELNEEQIARIAVNQFRLPGVDVATQFVRHYPLKEHFAHSVGYVGRINEQELKNLDPINYSGTH HIGKTGIERFYESELHGTVGYEEVETNARGRVLRVLKRTDPIPGKDIVLSIDSRLQEAAENALAGRRGAIVAIQPSTGDVLAMVSQPSYDPNLFVTGISF KAYAELRDSIDRPLYNRVLRGLYPPGSTVKPAVALAGLDAGVVTPTSRVFDPGYYQLPNYDHKYRNWNRYGDGWVSLESAIYRSNDTYFYDLAHKLGIDR LHAFMSRFGFGQKVALDMFGEADGLMPSREWKRKTRRQVWYPGETLILGIGQGYMQATPIQLAQMTALLANKGHWIRPHLAKTIDGQPPVDPDPMPDIVL RDPANWDRVDYGMQQVVHGARGTARKVGATSAYLIAGKSGTAQVVAIKQNERYDRSKLLERHRDHALFVGFAPANNPQIAVAVMVENGESGSGVAAPVVK QVMDAWLLDEHGKLKAEYAEPVAPLAAAVAKPEPTAAEPEAPALEQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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