Pseudomonas aeruginosa BWHPSA016, Q029_04880

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BWHPSA016 genomic scaffold adgfN-supercont1.2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCCTCTACGGCTGCGACTCGATCAACGGCAACAACGTATCGAAATGGTGCGACGCGGCCTACGACAAGCTGGTCAAGGCTGCCAAGCGGGTCTCCGACC AGGACAAGCGCAGCGAGCTGTACAAGCAGGCCCAGCACATCCTCAAGGAGCAGGTGCCGATCACCCCGATCGCCCACTCCACCGTGTACCAGCCGATGAA CAAGTCGGTGCATGACTTCAAGATCAGCCCCTTCTCGCGGAACGCCTTCTATGGCGTAGCCAACCAGCCCTGATGCCGACGCCACCCCGGTCGTGAAACG ACCGGGGTGCAGAAGAACGGCACGACCCGTACTTCATTTCTTTGCTTTTCCTGCCCGTGTTCCAGAACGGCGCTGCGCGCGTTCCGCCAGGAGCGCTCGC CTCGCCGTATTCGACCGCCGCGCCCAGGCGCGGGCGAAACCGGCGCAAACCTGGTGGGTAAAACAGGTGCCATGACAACAATAAAGGGAGCAATCAGGTG
DNA Sequence for Gene
>Q029_04880
ATGAGATACCAACGAGTGACCGGCGCGACGCTGGGATTGGCCTTGATGGCATCGGCCGCGCCAGGCTGGGCAGCGGACGAGCAGGCAACCTCGCCGACCC CGGACAATCCCAGCTACGCCGCCCAGGTGCAGAGCATCCCCAGCGTGGAGAAACCGATCAAGGGCCAGGCCGGCGCCAGCGGGCTGTTCGAGGGGCAGAG CCTGACCCTGACCACCCGCAACTTCTACTCGCGGGAAAACATGAAGGACAGCTTCACCTTCCGCATTCCCAAGGCCGGCGGCGGCTCCCAGCGCATCCAC CAGCGCAACGCCTGGGTCCAGGGCACGGTGCTCAAGTACAGCTCGGGCTACACCCAGGGCAGCATCGGCTTCGGCTTCGACGTCGCAGCCTTCAACGAGA TCGCCCTGGAGCGCGGCAAGGGCCGCATCGGCGGCGGCGGCAACCGGACCCTGGCGAACAGCGATGGCGAGGCGATCGGCGAGTGGTCCAAGCTGGGCGT CGCCAACATCCGCCTGCGCGCCTCGAATACCGAATTCAAGGCCGGTCGCTTCCTGGTCAACACTCCAGTGTTCAGCTATATCGACAACCGTGCCCTGCCC TCCAGCTTCACCGGCTTCGCCGTGACCAGCGAGGAGCTGGACAACCTCAGCCTGCAGGCCGGCAGCTTCCGCAAGGTCAGCCCGCGGACCGGTTCCGGCG ACGAGGACATGACCACCGAGTACGGCACCCGCCAGGTCAAGGGCGACCGCCTGAACTACCTGGGCGGCAACTACAAGCCGCTCGACGGGCTGGAAATCTC CCTCTATGGCTCGCATTTCCAGGACGTCTGGAACCAGTACTACCTGGGCGTGACCCACGACATCGGCGACCTCGAGAACGGCATCGCCCTGCGCACCGCC TTCAACGGCTACCACACCGGCGACACCGGCGCGCGCGAGGCCGGCTACATCGACAACGACACCTGGAGCCTGGCCTTCACCCTCGGCCATCGCGCCCACG CCCTGACCCTGGCCTACCAGCAGGTCGACGGCAACGAATACTTCGACTACGTGCACGAGACCTCGGCGATCTTCCTGGCCAACTCGATGCTGGCCGACTA CAACAGCCCCAACGAGAAGTCCGCGCAGATCCGCTACGAGACCGACTGGAGCTACTACGGGGTCCCCGGCCTGAGCACCGGCGTGTGGTACGTGAAGGGC TGGGACATCGACGGCACCCACTACGACGGCGATCGCAACGGTGCCTACGGCAACTACGCCGAGGTGCGCGCCCAGGACGGCGAGAAGCACCACGAGCTGG GCCTGATGGCGGCCTACAAGGTGCAGAACGGGCCGATCAAGGACAGCACCTTCAAGCTCACCTACATGATGCACAAGGCCAGCCAGAACCAGGTCGACGG CAGCGTCAACGAACTGCGCCTGGTCAGCACCTTCCCCTTCAACCTGCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATGCGACAACCGGCGGCCCCGGCGACGGGGCCCACGAGGAGGACCCCATGCTCCATCCGTTGCTCCGACACCTGCCCCTGGCCCTGGCGCTATGCGCC GCCGGCGCGGCCCAGGCGAAGAACCTGGTGGTCTGCACCGAGGCCAGCCCGGAAGGCTTCGACATCGTCCAGTACACCGGCGCGGTGACCGCCGACGCCT CCGCGGAAACCGTGTTCAACCGCCTGCTCGCCTTCCGCCCCGGCACCACCGAGGTGATCCCGGGGCTGGCCGAGCGCTGGGACGTCAGCGCCGACGGACT GAGCTATACCTTCCACCTGCGCCCCGGCGTGAAATTCCATACCACCGACTACTTCAAGCCGACCCGGAGCCTGAATGCCGATGATGTGCTGTGGACCTTC CAGCGCGCCCTCGATCCGAAGCATCCCTGGCATGCCTCGGCGCTGCGCGGCTACGCCTACTTCGACGCGATGGGCATGGGCGAGCTGATCAAGTCGGTGG
Amino Acid Sequence
>porin
MRYQRVTGATLGLALMASAAPGWAADEQATSPTPDNPSYAAQVQSIPSVEKPIKGQAGASGLFEGQSLTLTTRNFYSRENMKDSFTFRIPKAGGGSQRIH QRNAWVQGTVLKYSSGYTQGSIGFGFDVAAFNEIALERGKGRIGGGGNRTLANSDGEAIGEWSKLGVANIRLRASNTEFKAGRFLVNTPVFSYIDNRALP SSFTGFAVTSEELDNLSLQAGSFRKVSPRTGSGDEDMTTEYGTRQVKGDRLNYLGGNYKPLDGLEISLYGSHFQDVWNQYYLGVTHDIGDLENGIALRTA FNGYHTGDTGAREAGYIDNDTWSLAFTLGHRAHALTLAYQQVDGNEYFDYVHETSAIFLANSMLADYNSPNEKSAQIRYETDWSYYGVPGLSTGVWYVKG WDIDGTHYDGDRNGAYGNYAEVRAQDGEKHHELGLMAAYKVQNGPIKDSTFKLTYMMHKASQNQVDGSVNELRLVSTFPFNLL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site