Strain | Pseudomonas aeruginosa BWHPSA017 genomic scaffold adgeW-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGGTTGGCCTGCTGGAAGAGATCGAGGCCTGGCCGCAGGGCTGGGACAGCGACGTCGGTCCCGGCGGCGCGCTGCTGTCCGGCGGCCAGCGGCAACGC CTGTGCCTGGCTCGCGGGCTGCTCTCGACGGCGCCGTTGCTGCTGCTCGACGAGCCCACCGCCAGCCTCGACGCCGCCAGCGAGGCGCAGGTGCTGCGCA GCCTGCTCGGGTTGCGCGGCCGGCGCACCCTGCTGGTAGTGACCCACCGCCCGGCGCTGGCGCGTCAGGCCGACCAGGTACTGCTGCTGGAGGAGGGGCG CCTGCGCCTCAGCGGACGTCACGCCGATCTGCTCGTCCGGGACGACTGGTATGCCGGTTTCGTCGGGCTGGCGGGCGAGGAAAGTTCCGCGACGGTCGTG GATCGATAGAGAAAGACCGGCAATCGAAAAAGCCCCGGAGACGATTTCTTCATAATGATAAGCATTATCAAATCGTATATCCCCCGAGGCTGTTCGAACG
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DNA Sequence for Gene |
>Q030_03461
ATGAAAACGGAGACGAAGGTGATCAAGGGACGCCAGGGCATCGCCCGCAATCGGCACACCCCGTTGTGCCTGGGGCTGCTGCTGGCGCTGAGTCCGCTGG CCGCGGCCGTGGCCGACGCGCGCAAGGACGGCGAGACGGAACTGCCGGACATGGTGATCAGCGGAGAAAGCACGTCTGCCACCCAGCCGCCGGGGGTGAC TACCCTGGGCAAGGTGCCGCTCAAGCCGCGCGAGCTGCCGCAGTCCGCCAGCGTCATCGACCATGAGCGCCTCGAACAGCAGAATCTGTTCAGCCTCGAC GAAGCCATGCAGCAGGCCACCGGGGTCACCGTGCAGCCGTTCCAGCTGCTGACCACCGCCTACTACGTGCGCGGCTTCAAGGTCGACTCCTTCGAGCTGG ACGGGGTGCCGACGCTGCTTGGCAATACTGCCAGTTCGCCGCAGGACATGGCGATCTACGAGCGGGTCGAGATCCTTCGCGGCTCCAACGGACTGCTGCA TGGCACCGGCAACCCGGCGGCCACCGTCAACCTGGTGCGCAAGCGGCCGCAGCGCGAATTCGCCGCCAGCACTACCCTCAGCGCCGGGCGCTGGGACCGC TACCGCGCCGAGGTCGACGTCGGCGGCCCGCTGAGCGCCAGCGGCAACGTGCGCGGCCGAGCGGTGGCCGCCTACGAGGACCGCGACTACTTCTACGACG TGGCCGACCAGGGCACCCGCCTGCTCTACGGGGTGACCGAGTTCGACCTGAGCCCCGACACCCTGCTCACCGTCGGTGCGCAATACCAGCACATCGACTC GATCACCAACATGGCCGGGGTACCGATGGCCAAGGATGGGTCCAATCTCGGGCTGTCCCGCGACACCTACCTCGATGTCGACTGGGACCGCTTCAAGTGG GACACCTACCGCGCCTTCGGCTCCCTCGAACAGCAACTGGGCGGCGGCTGGAAAGGCAAGGTCAGCGCCGAATACCAGGAAGCCGATTCGCGCCTGCGTT ACGCCGGCTCCTTCGGCGCCATCGACCCGCAGACCGGCGACGGTGGCCAGCTGACGGGCGCCGCCTACAAGTTCAAGAGCATCCAGCGCAGCCTCGACGC CAACCTCAATGGGCCGGTGCGACTGTTCGGCCTGACCCACGAACTGCTCGGTGGGGTCACCTACGCCCAGGGCGAGACCCGCCAGGACACCGCACGCTTC CTCAACCTGCCGAACACCCCGGTCAATGTCTACCGCTGGGACCCGCACGGCGTGCCGCGCCCGCAGATCGGCCAGTACACTTCGCCGGGCACCACCACCA CCACCCAGAAAGGCCTCTATGCCCTGGGTCGGATCAAGCTCGCCGAGCCGCTGACCCTGGTGGTCGGCGGCCGCGAAAGCTGGTGGGACCAGGACACCCC GGCCACCCGCTTCAAGCCCGGTCGCCAGTTCACGCCCTACGGCGGGCTGATCTGGGACTTCGCCAGGGACTGGTCGTGGTATGTCAGCTACGCCGAGGTC TACCAGCCGCAGGCGGATCGCCAGACCTGGAACAGCGAGCCGTTGAGCCCGGTGGAAGGCAAGACCTACGAAACCGGGATCAAGGGCGAACTGGCCGACG GCCGCCTGAACCTGTCGCTGGCGGCGTTCCGCATCGACCTGGAGAACAATCCGCAGGAAGACCCGGACCATCCGGGGCCGCCCAACAATCCGTTCTACAT CAGCGGCGGCAAGGTGCGCAGCCAGGGCTTCGAGCTGGAAGGCACCGGCTACCTGACGCCCTACTGGAGTCTCTCGGCCGGCTACACCTACACCAGCACC GAGTACCTCAAGGACAGCCAGAACGACTCGGGGACGCGCTACTCCACCTTCACCCCGAGGCACCTGCTGCGCCTGTGGAGCAACTACGACCTGCCCTGGC AGGATCGGCGCTGGAGCGTCGGCGGCGGACTCCAGGCGCAGAGCGACTACAGCGTCGACTACCGCGGCGTGAGCATGCGCCAGGGCGGCTACGCACTGGT CAACATGCGCCTGGGCTACAAGATCGACGAGCACTGGACGGCGGCGGTCAACGTCAACAACCTGTTCGACCGGACCTACTACCAGAGCCTGTCCAACCCC AACTGGAACAACCGCTACGGCGAACCGCGCAGCTTCAACGTCAGCCTGCGGGGCGCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCCGCGCCAGTCGGGCTTCGGCTGGGCCTGGCGGGTTCCGCTGGCGCTCGCCGGCAGCCTGGCGGCGGCGACCGCCAGCGGCTATCTGTTGACTCGCGG GCTGCCCCTGGACGACCCGCTCGAGCGTCTCTACGCCGGGCTCTTCGGCGCGCTCGGGGTGGGCTTGTTGCTGCTTGTCGGCGGGTTGCTGGCGCGTGGT CCGGGCAACTTCGCCTGGCGCCTGGGCGGTAGCCTGCTGGTACTGGGCCTGGCGTTGTGGCTGCTGGCGGGGCGCGGTTGAAGTGGCGGCGCGTCCTCTC CTGCTCTCGCTGCACGGTGGCGCCGGCGCGCTGTTCGGCGTGTTGCTGTTCGTGGTGCTGTTCAGTGGCGCCTGGAGTCTTGGCCACGACGACCTGCGCG AGTGGCTGCGGGCCCCGGCGCAGGCGGGAGGAGAAGCCCTTGCGCTGGAGCGCCTGCTCGAACGGGCGGGCGAGGAAGGCGTCGACATCCGCGATGCGAC
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Amino Acid Sequence |
>amino acid ABC transporter substrate-binding protein
MKTETKVIKGRQGIARNRHTPLCLGLLLALSPLAAAVADARKDGETELPDMVISGESTSATQPPGVTTLGKVPLKPRELPQSASVIDHERLEQQNLFSLD EAMQQATGVTVQPFQLLTTAYYVRGFKVDSFELDGVPTLLGNTASSPQDMAIYERVEILRGSNGLLHGTGNPAATVNLVRKRPQREFAASTTLSAGRWDR YRAEVDVGGPLSASGNVRGRAVAAYEDRDYFYDVADQGTRLLYGVTEFDLSPDTLLTVGAQYQHIDSITNMAGVPMAKDGSNLGLSRDTYLDVDWDRFKW DTYRAFGSLEQQLGGGWKGKVSAEYQEADSRLRYAGSFGAIDPQTGDGGQLTGAAYKFKSIQRSLDANLNGPVRLFGLTHELLGGVTYAQGETRQDTARF LNLPNTPVNVYRWDPHGVPRPQIGQYTSPGTTTTTQKGLYALGRIKLAEPLTLVVGGRESWWDQDTPATRFKPGRQFTPYGGLIWDFARDWSWYVSYAEV YQPQADRQTWNSEPLSPVEGKTYETGIKGELADGRLNLSLAAFRIDLENNPQEDPDHPGPPNNPFYISGGKVRSQGFELEGTGYLTPYWSLSAGYTYTST EYLKDSQNDSGTRYSTFTPRHLLRLWSNYDLPWQDRRWSVGGGLQAQSDYSVDYRGVSMRQGGYALVNMRLGYKIDEHWTAAVNVNNLFDRTYYQSLSNP NWNNRYGEPRSFNVSLRGAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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