Strain | Pseudomonas aeruginosa BWHPSA019 genomic scaffold adgfe-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TATACATCGCGATGGTGCACATCATGCTGCCGTTCATGATCCTGCCGATCTACAGCGTGATGAAAGGCATTTCGCCGAGCTACATGCGCGCCGCGATTTC CCTCGGCTGCCACCCGTTCGCCAGCTTCTGGCGGGTGTATTTCCCACAGACCGTCGCGGGCGTCGGCGCCGGTTGCCTGCTGGTGTTCATCCTGTCCATC GGCTACTACATCACCCCGGCGCTGCTGGGCAGCCCGAACGACCAGATGGTCAGCTACTTCGTCGCCTTCTATACCAACAGCACCATCAACTGGGGCATGG CCACCGCCCTCGGCGGCCTGCTCCTGCTCGCCACCCTGGTGCTCTACGTCGTCTACAGCTGGCTGGTGGGCGCCAGCCGCCTGCGCCTGGGATAGAGGGC CTTCCGAGAAGGCCAACCGATTCCCCTCTGCCTTCGGAAAAAAGGTTGCCCGGAGGGCGGGGAGAGGGGGATCCGCACGAAACACATTGGAGAGCGAGTC
|
|
DNA Sequence for Gene |
>Q032_05317
ATGCTGAGTCCCTACATGTCCCCGGTCGAGCGCCTGTGGTTCTACTCCCTGCGCATCCTCTGCGGCCTGGTACTGCTGTTCCTGGTACTGCCGGTGCTGG TCATCGTGCCGCTGTCGTTCAACTCCGGCACCTTCCTGGTCTACCCGCTGCAAGGGTTCTCCCTGCGCTGGTACGCCGACTTCTTCCAGTCCGCCGAGTG GATGCGCTCGTTGACCAACAGCATGATCGTCGCTCCGGCGGCGACCCTGCTGGCAATGGTCTTCGGCACTCTGGCCGCGATCGGCCTGACCCGCGGCGAG TTCCGCGGCAAGGCACTGGTGATGAGCCTGATGATTTCGCCGATGGTGGTGCCGGTGGTGATCATCGGCGTGGCCAGCTACCTGTTCTTCGCTCCGCTGG GGCTCGGCAACAGCTACCTGTCGCTGATCGTGGTGCATGCGGTGCTCGGCGTGCCGTTCGTGATCATCACCGTCTCCGCGACCCTGCAGGGGTTCAACTA CAACCTGGTGCGCGCCGCCGCCAGCCTCGGCGCGCCGCCGCTGACCACCTTCTTCCGGGTGACCCTGCCGCTGATCGCTCCGGGAGTGATTTCCGGCGCG CTGTTCGCCTTCGCCACCTCGTTCGACGAAGTGGTAGTGACCCTCTTCCTCGCCGGTCCCGAGCAGGCCACCCTGCCGCGGCAGATGTTCAGCGGCATTC GCGAGAACCTGAGCCCCACCATTGCCGCCGCGGCGACCTTGCTGATCGGTTTCTCCGTACTGCTGTTGCTGACCCTGGAATGGCTGCGCGGGCGCAGCGA GAAGATGCGTACCGCACAACCCGGCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGCGCAGGGCGCGCCCGGCTTGGTCCGGGCGTCGGCTGCTGCGGCGAAAAGTCGTCATTTTCACCGCCAAAAACCGATAACGGCTACAATGCGCGCCTTC CGTGATCCCCTTTGAGGTGCGCCATGCAACCCTTCGCCATCGCTCCGTCGATCCTTTCCGCCGATTTCGCCCGCCTGGGCGAGGACGTGGACAAGGTGCT CGCCGCCGGTGCCGACATCGTTCACTTCGACGTGATGGACAACCACTACGTGCCGAACCTGACCATCGGCCCGATGGTCTGCTCGGCGCTGCGCAAGTAC GGCGTGAGCGCGCCGATCGACGTGCACCTGATGGTGTCCCCGGTGGATCGCATCATCGGCGACTTCATCGAAGCTGGCGCCACCTACATCACCTTCCATC CGGAAGCTTCACAGCACATCGACCGTTCCCTGCAACTGATCCGTGACGGCGGTTGCAAGGCGGGCCTGGTGTTCAACCCGGCCACTCCGCTGGAGGTGCT
|
|
Amino Acid Sequence |
>polyamine ABC transporter permease
MLSPYMSPVERLWFYSLRILCGLVLLFLVLPVLVIVPLSFNSGTFLVYPLQGFSLRWYADFFQSAEWMRSLTNSMIVAPAATLLAMVFGTLAAIGLTRGE FRGKALVMSLMISPMVVPVVIIGVASYLFFAPLGLGNSYLSLIVVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGAPPLTTFFRVTLPLIAPGVISGA LFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIGFSVLLLLTLEWLRGRSEKMRTAQPGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|