Pseudomonas aeruginosa PAO1, PA4403 (secA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGCCGTTCGGGCGCCGGGTCAATCCGGTGAGCGGCCGCCTGAGCATGCACAAGGGCATCGACTTCGCCGCGCCGGCCGGCAGCGACGTGGTGGCCGTG GCGGCGGGGGTGGTGACCTGGTCCGGGCGCAAGAACGGCTATGGCAACGTGGTCGAGGTCGGGCACGCCGATGGCTACACCACGTTGTATGCCCATAACC AGAAGAACCTGGTCGAGGTCGGTGACCTGGTCAAGCGCGGCCAGGTGCTGGCCAAGGTCGGCAGCACCGGACGCTCCACCGGCTACCACGTACATTTCGA AGTGATGAAGGATGGCCGGGTAATGAATCCGCAAAGCTTCATCGCACGCGCGTCTGTTTCCGAGTGAGCGACGCGCATTGATCTGCTGTACTTTTCTCAT ACCCGTTTCCGGGTAGAATGTTCCCTTTCATGCCGTTGATCGGCACGGGCCGCCGGATGGGTGAGCCTTCCATTCCCCACGTGTGGATGACCAAGTCGAT
|
|
| DNA Sequence for Gene |
>PA4403
|secA
ATGTTTGCGCCTTTGTTGAAGAAACTCTTTGGAAGCAAGAACGAGCGTGATGTAAAGCGCATGGCCAAGGCTGTACAGGCCATCAATGCGCTCGAGCCCC AGATGGTGGCGCTCTCCGACGAGCAGTTGAAGGCGAAAACGGCTGAATTCCAGCAGCGCTACGCCAAGGGCGAAACGCTCGACCAATTGCTGCCCGAAGC CTTCGCCGTGGTTCGCGAGGCTGGCAAGCGGGTGATGGGCATGCGCCACTTCGATGTCCAGCTGATCGGTGGCATGACCCTGCACGACGGCAAGATCGCC GAAATGCGTACCGGCGAGGGCAAGACCCTGGTGGGCACCCTGCCGGTCTACCTCAACGCGCTGTCCGGCAAGGGCGTGCACGTGGTCACGGTGAACGACT ACCTGGCGCGCCGCGACGCCAACTGGATGCGCCCGCTGTACGAGTTCCTCGGCCTCAGCGTCGGCGTGGTCACTCCCTTCCAGCCGCCGGAAGACAAGCG CGCCGCCTACGCCGCCGACATCACCTACGGCACCAACAACGAATTCGGCTTCGATTACCTGCGCGACAACATGGCCTTCAGCCTGGACGACAAGTTCCAG CGCGAGCTGAACTTCGCCGTGGTCGACGAAGTGGACTCGATCCTCATCGACGAGGCGCGTACCCCGCTGATCATCTCCGGCCAGGCCGAAGACAGCTCCG AGCTGTACATCAAGATCAACAAGCTGATCCCGCGTCTCAAGCGCCAGGTTGAAGAGGTCGAGGGCAAGCCGACCGAGGAAGGCCACTACAGCATCGACGA GAAGACCCGCCAGGTCGAACTCAACGAGCAGGGCCACCAGTTCATCGAGGACCTGCTGAGCCAGAACGGCCTGCTCGGCGAAGGCGAGAGCCTCTACTCG GCGCACAACCTGAGCCTGCTGACCCACGTCTACGCAGCGCTGCGCGCGCACACCCTGTTCCACCGCAACGTCGAGTACATCGTCCAGGGCGACCAGATCC TCCTGATCGACGAGCACACCGGCCGCACCATGCCTGGCCGACGCCTGTCCGAGGGCCTGCACCAGGCCATCGAGGCGAAGGAAGGCTTGCCGATCCAGGC CGAGAGCCAGACCCTGGCCTCCACCACCTTCCAGAACTACTTCCGCCTGTACAACAAGCTGGCCGGCATGACCGGCACCGCCGATACCGAGGCCTTCGAG TTCCGCCAGATCTACGGTCTCGACGTGGTGGTGATCCCGACCCACCGGCCGATCGCGCGCAAGGACTTCAACGACCTGGTCTACCTGACCCAGGAAGAGA AGTACGCGGCGATCATCACCGACATCAAGCAGTGCCAGGCCCTCGGCCGGCCGATCCTGGTCGGCACCGCGTCGATCGAGAGTTCCGAGTACGTTTCCAA GCTGTTGCAAGAGGCAGGCATCGAGCACAAGGTGCTCAACGCCAAGTACCACGAGAAGGAAGCCGAGATCATCGCCCAGGCTGGCGCGCCCGGTTCGGTG ACCATCGCCACCAACATGGCCGGCCGCGGTACCGACATCCTCCTCGGCGGCAACTGGGAAGTCGAAGTCGCGGCCCTGGAGAACCCCACCGAGGAGCAGA TCGCCCAGATCAAGGCCGAATGGCAGAAGCGCCACCAGCAGGTGATCGAGGCGGGCGGCCTGCACGTGATCGCCTCCGAGCGCCACGAATCCCGCCGGAT CGACAACCAGTTGCGCGGCCGTGCCGGTCGTCAGGGCGACCCGGGTTCCAGCCGCTTCTACCTGTCGCTGGAAGACAACCTGATGCGGATCTTCGCCTCC GACCGGGTGAAGAACTTCATGAAGGCGCTGGGCATGCAGTCCGGCGAGGCGATCGAGCACCGCATGGTGACCAACGCCATCGAGAAGGCCCAGCGCAAGG TCGAAGGGCGCAACTTCGACATCCGCAAGCAACTGCTGGAATTCGATGACGTAGCCAACGAGCAGCGCAAGGTGATCTACCACATGCGCAATACCCTGCT GTCGGCAGAGGACGTGGGCGAGACCATCAAGGAATTCCGCGAGGAAACCCTCAGCGCCACCATCAACCAGCACATTCCGCCGCAGTCGCTGCCCGAGCAG TGGGACATCGAAGGCCTGGAGGCTGCGCTGTACAGCGACTTCGCCGTGCGCCTGCCGATCCAGCAGTGGCTGGACGAAGACGACAAGCTGTACGAGGAAA CCCTGCGTAGCAAGATCCTCGAGCAGATCGTCGCCGCCTACTACGAGAAGGAAGAGCTGGCCGGCGCCGAAGCCCTGCGCGCCTTCGAGAAGCAGATGCT GCTGCGGGTACTGGACGACCTGTGGAAGGACCACCTGTCGACCATGGACCACCTGCGGCACGGCATCCACCTGCGTGGCTACGCGCAGAAGAATCCGAAG CAGGAATACAAGCGCGAGTCCTTCACCCTGTTCCAGGAGCTGCTGGACTCGATCAAGCGCGACACCATCCGCGTGCTGTCCCACGTCCAGGTCCGTCGCG AAGACCCGGCCGAAGAGGAGGCCCGCCTGCGTCGCGAGGCGGAGGAACTGGCCAAGCGCATGCAGTTCCAGCACGCCGAGGCTCCCTCGATGGAGCAGGC CGTGGCCGGCGAGGAAGAAGAGCTTCCCGAGGGCCCGGCTCCGGTCGTGCCGCTCGAGCCTGTGCGCAACGAGCAGAAGATCGGCCGCAACGAGCCTTGC CCGTGCGGTTCCGGCAAGAAATACAAGCACTGCCACGGGCAGCTGGACTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCTTCCCGCCTGGTTCACCAACGCCGCGACCGGTCCTGCCGCTCGCGGCGTTTGTTCGAATTGGCGCCAGCCCGGCGCCGATGCGTTTTCCGTCACGCCG TCGCGGACGGCATCGAGTCCACTGTTTGGTAAAGGAGCGCGTTCCCATGGCTGTCGGTCTTGGCCCCCTGTCCACCCTGCACCCGGTCCCCGGTTTCGAA CTCGGCATCGCTTCCGCCGGCATCAAGCGACCGGGGCGCAAAGACGTGGTGGTCATGCGCTGCGCCGAAGGCTCCAGCGTGGCCGGGGTGTTCACCCTGA ACGCGTTCTGTGCCGCGCCGGTGACCCTGGCCAAACAGCGTTTCCTCGGTGAGGTGCGCTACCTGCTGACCAATACCGGCAACGCCAACGCCGGTACCGG CGAGGCCGGCCTCGCCGCCGCTGCGCAAACCTGCGCCAAGCTCGCCGAACTGGCCGGGGTCGCCGAGACTTCGGTGCTGCCATATTCCACCGGGGTGATC
|
|
| Amino Acid Sequence |
>secretion protein SecA
MFAPLLKKLFGSKNERDVKRMAKAVQAINALEPQMVALSDEQLKAKTAEFQQRYAKGETLDQLLPEAFAVVREAGKRVMGMRHFDVQLIGGMTLHDGKIA EMRTGEGKTLVGTLPVYLNALSGKGVHVVTVNDYLARRDANWMRPLYEFLGLSVGVVTPFQPPEDKRAAYAADITYGTNNEFGFDYLRDNMAFSLDDKFQ RELNFAVVDEVDSILIDEARTPLIISGQAEDSSELYIKINKLIPRLKRQVEEVEGKPTEEGHYSIDEKTRQVELNEQGHQFIEDLLSQNGLLGEGESLYS AHNLSLLTHVYAALRAHTLFHRNVEYIVQGDQILLIDEHTGRTMPGRRLSEGLHQAIEAKEGLPIQAESQTLASTTFQNYFRLYNKLAGMTGTADTEAFE FRQIYGLDVVVIPTHRPIARKDFNDLVYLTQEEKYAAIITDIKQCQALGRPILVGTASIESSEYVSKLLQEAGIEHKVLNAKYHEKEAEIIAQAGAPGSV TIATNMAGRGTDILLGGNWEVEVAALENPTEEQIAQIKAEWQKRHQQVIEAGGLHVIASERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDNLMRIFAS DRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEFDDVANEQRKVIYHMRNTLLSAEDVGETIKEFREETLSATINQHIPPQSLPEQ WDIEGLEAALYSDFAVRLPIQQWLDEDDKLYEETLRSKILEQIVAAYYEKEELAGAEALRAFEKQMLLRVLDDLWKDHLSTMDHLRHGIHLRGYAQKNPK QEYKRESFTLFQELLDSIKRDTIRVLSHVQVRREDPAEEEARLRREAEELAKRMQFQHAEAPSMEQAVAGEEEELPEGPAPVVPLEPVRNEQKIGRNEPC PCGSGKKYKHCHGQLD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|