Pseudomonas aeruginosa PAO1, PA4367 (bifA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| AmrZ binding site | 4894385 | 4894397 | - |
ECO:0000314
direct assay evidence used in manual assertion |
24603766 | Details |
| Inverted repeat: ACGAAAAAGCCCGGC-N4-GCCGGGCTTTTTCGT | 4894293 | 4894326 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1113 | 4894294 | 4894325 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 1114 | 4894301 | 4894318 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Shine-Dalgarno sequence | 4894448 | 4894451 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GATGCTGACCA-N27-TGGTCAGCATC | 4895001 | 4895049 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AGAGCGGCTC-N33-GAGCCGCTCT | 4896912 | 4896964 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |