Strain | Pseudomonas aeruginosa BWHPSA022 genomic scaffold adgeq-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCACCGGCACCTGCTGCATCGAAAGTGGGTTTGTCACAAGAAAATTTTTCTCCGCATGATGACTAATGGAAGCCATGATTGACGATTCGATTTTTGAAAA AATTGATAATCTGATTGGCAGGTTGTCAGTCAGTAGGTCTACGGTAGATGAAAATGAGCTTTGCCGTGTTGCGAGGGTTTTGCCTGGCGATAGGGAGTTA GATGTTATAGAGAGGCTGAAAAACAAAGGGGACGTATTTATTTTTGCTGCTCTAAAGATAAAAGGCAGGTAGGTTTTCCCTGTTCAGTAATTTCTTGCTC TTTAAAAATTTACCTTTTCGATTTAGAAGAAGAGCACCGTGCAAGACCTCCCTGTCGCCACATCCGCAGAGTCCTGAACCCCCGGCCCTGTCATCCCTGA CGGGTCGCTCGCCGGGGCAACGCATGCCTTGCCTGTTTCCGGCTCGCCCTACAAGGACCAACTGCACCTGCAACTGGGTGTGGGTTTGAGCGCGGAGCAG
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DNA Sequence for Gene |
>Q035_04817
ATGGCGGCGCTGACCCACGACATCGTGTGGTTGGAAGAGGTCGAGGTGAACGGCGAGAAGGTCCTCGCGCCAGTGGTCTACCTGGCCCAGGCGGAGGGTC GGCTGGCACCCAACGGTGCGCTGATCCAGGGCCGCGACGTGAAGCTGGTGAGCGGCGGCGACCTGCATAACGTCGGCACCCTGCGCGCGCGGAACGACCT CTCGGCGACGGCCGACAACCTCGACAACAGCGGCCTGATCGAGGCCGGCAAGCGCCTCGACCTGCTCGCCGGCGACTCGATCCGCAACCGCCAGGGCGGG GTCATCGCCGGGCGTGACGTGAGCCTCACCGCGCTGACCGGCGACGTGATCAACGAACGCAGCGTGACCCGCTACGACAGCGCGCTCGACGGCCGCACCT GGGAGCGCAGCTTCGCCGACAGCGCCGCGCGGTTGGAGGCGGCGAACAGCCTGAACGTCCAGGCCGGACGCGACATCGCCAACCTCGGCGGGGTGCTGCA GAGCCGCGGCGACCTCAGCCTCGACGCCGGACGCGACGTCACAGTCGCCGCCGTCGAGGACCGCCAGGGCCAGACCCGCTGGAACACGTCGCGGCTACAG AGCGTGACCCAGCTCGGCGCCGAAGTCAGTGCTGGGCGGGACCTGAACGTCAGCGCCGGGCGCGACCTCAGCGCAGTGGCCAGCGCCCTCGAAGCGCGCC GCGACATCGCCCTCTCCGCCGGGCGCGACGTGACCCTGGCGGCGGCGGCGAACGAGGAGCATGCCTACAGCAAGACCAGGAAGGTCATCTACCAGGAAGA CAAGGTCGCCCAGCAAGGCACCCGCGTGGATGCCGGCGGCGACCTGGCGATCAATGCCGGACAGGACCTGCGCCTGATCGCGAGCCAGGCCAGCGCCGGC GACGAGGCCTACCTGGTGGCCGGCGACAAGCTGGAACTGCTGGCCGCCAACGACAGCAACTACTACCTGTACGACAAGAAGAAGAAAGGCGACTTCGGCC GCAAGGAAACCCGGCGCGACGAAGTCACCGACGTCAAGGCGGTGGGCAGCCAGATCAGCAGCGGCGGCGACCTCACCCTGCTCAGCGGCGGCGACCAGAC CTACCAGGGCGCGAAGCTGGAATCGGGTAACGACCTGGCCATCGTCAGCGGCGGCGCGGTGACCTTCGAGGCGGTGAAGGACCTGCACCAGGAGAGCCAC GAGAAGAGCAAGGGCGACCTGGCGTGGCAGTCGTCGAAGGGCAAGGGCCAGACCGACGAAACCGTGCGCCAGACCCAGATCGTGGCCCAGGGGAATCTGG CGATCAAGGCCGTGGAAGGGCTGAAGATCGACCTCAAGCATATCGACCAGAAGACCGTGAGCCAGACCATCGATGCGATGGTGCAGGCGGATCCGCAACT GGCGTGGCTGAAGGAGGCCGAGCAGCGCGGGGATGTGGACTGGCGCAGGGTGCAGGAGGTGCACGATAGCTGGAAGTACAGTAACTCGGGCATGGGGCCG GCGACGCAGATAGCTGTCGCCATCGCGGCGGCAGCCATCGGTGGCATGGCGGCAGCGGGAGCGCTCAGTGGAGCAGGAGTGGGTGCCAGTAGCTTCGCCA TGGGCGCAGGAGTTGGTGCGGCAGGAAGCCTGTCGGGCACGGCAGCGGTCAGCCTGATCAACAACAAGGGCGATCTCGGGAAGGTGCTGAAAGACAGCTT CAGTAGCGACAGTCTGAAGCAGATTGCTATTGCGAGCCTGACCGGGGGGCTGACGGCTGAGTACTTCGACGGGATTCTTCAGACCAAGACTGATCCGCTT ACTGGAAAGGTCACGGTAGACCTCAGCAGCCTATCTGGTGTTGGTCGCTTCGCTGCCAATCAGGCGATGCAGAACGCTACATCCACTGTACTGAGCCAGG CCTTGGGCCAGGGCGGGAGCCTGAACGAGGCGCTGAAGAGCGCGCTCTACAACAGTTTCGCGGCGGCAGGTTTCAACTTCGTCGGCGATATCGGCCAGGA ATACAGCCTGAAGCCAGGCGATCCTTCGATGGTGACCATGCATGCCCTGATGGGTGGCCTGGCGGCGCAGGTCAGCGGTGGCGATTTCGCCACGGGCGCC GCGGCGGCTGGCGCCAATGAAGCGCTGGTGGCCAAGCTAGACCAGGCCTTCAAGAGCTTGAGCCCTGAGAACCGTGAAGCCATGGTCACTATGGGGTCGC AATTGGTTGGTGTTCTGGCTGCGGCGGTACGCGATCCCGATGCGACAGGCAAAGCTCTGGAAAGCGCTGCTTGGGTAGCGAAGAACTCGACGCAATACAA CTTCCTCAACCATCAGGATGTGGCCGATCTGGATAATGCCTTGCAGAAATGCAAGTCCCAGGGAAATTGCCGTCAGGTAGAGGAAGAGTTCAAGGCGCGT AGCGACGAGAACCGGCGGAGGTTGAATGGCTGCGTGGCTGTGGGTAATTGCGCGGAGATTCGTGCGGAGATCGATGCGGGGTCTACGGCTCTCAACGAGC TGGTGGCCCGGCAGGAAACAGCTAATCCGGGAGGAAGTGACAGCGATATAGCCTACGGTTTCCTGATGGGCCGAAACGTCGTCGACTGGACGACGGCTGG TCAGTTGCACCTGGAGCAGACCGCCAACCTCTGGTGGAACGGCAATCCACAGTGGCAGAAGGAAGTCGGTGCATACCTGGACCAGACGGGGTTCAATCCG TTCGGAATCGGCGTTCCGGCAATGGGCGGTGCCGCTGGCAAGGTATCGGCCAAGGCGCTCATGAATGCGCTGAAGGCGGGAGAGTTGCCCAAAGGAGAGG TGGCCCCAGGAAAGGCTAATCTGCCTACCATTGGGGCGTTGGCGGATGCTGAGGCGGGGATGCCTTATACGCATCCAATAAAAACACCTTCAAATGAGAC TGCTCGACTTTTAGCTTCATCTCAAGAACCTTATAAAGGTGGGCAGTCAATTACAAATGCTGGCAGGGCCGTTACTAAGCATCCTGAGTACTTTGGATTC AGTTCAACACAGGAACTACGGAAGATGTACCGGACAGACTCTCAGATTAATGAGCTTGCTGGAAAGGCAATAAATGAAATACTCCAGAGTGGAGTGAAGA GTAGTGGCGCCGGGGGAAGATATCCGGGAGGCTGGATAACTTATACATTACCAGACGGTCGGGCTGCTAGTTGGGGGGGGATGGTAAATTTATTGGATTT AGAGGGGTGCAAAAATGAAGCTAAATTTGGTTTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAAAGTTGGAGATATTAATAGTGATTATCCATATCTTTGTGTATATAGGGAGGGGGAGAGAGAGCCTTTTATGGAGATATCAGTGAATCAAGAAAGAAAG ATTGAGTTTGTTTTTTATTCTAGAGCTGATAATTTATCCCTAAGCTCTGAAGAATTCTATGAAATATATGGTAGAGCGGAAGCTTTTTTGCCCCAAGCTT TAGAGAATGAAGATTCACTGTAATGCTTAAATAAAGAGAGTGGCTATAATGGGATGATTTATTTTTCTGACTCTAGTTTTTTGAGCAAAGGAGGCATCCG TGATGCTTAATTAAGGGCGAGTAGTTTAAAACAGGGGACCATAAACAGCATAAAGGGGACAGCATAAAGGGGACAGATTTATTTTCCCTACTCTAATTTT CTAAGCAGGGAGGCTCCAGCGCAGACGCCGTAAGGAGGCTCCGCGATGCCTAGGCAGAGGCGAGTGGTTTTACTGAACTATCCGCTTTACGTGGTCCAGC
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Amino Acid Sequence |
>hypothetical protein
MAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLAPNGALIQGRDVKLVSGGDLHNVGTLRARNDLSATADNLDNSGLIEAGKRLDLLAGDSIRNRQGG VIAGRDVSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARLEAANSLNVQAGRDIANLGGVLQSRGDLSLDAGRDVTVAAVEDRQGQTRWNTSRLQ SVTQLGAEVSAGRDLNVSAGRDLSAVASALEARRDIALSAGRDVTLAAAANEEHAYSKTRKVIYQEDKVAQQGTRVDAGGDLAINAGQDLRLIASQASAG DEAYLVAGDKLELLAANDSNYYLYDKKKKGDFGRKETRRDEVTDVKAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTFEAVKDLHQESH EKSKGDLAWQSSKGKGQTDETVRQTQIVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQLAWLKEAEQRGDVDWRRVQEVHDSWKYSNSGMGP ATQIAVAIAAAAIGGMAAAGALSGAGVGASSFAMGAGVGAAGSLSGTAAVSLINNKGDLGKVLKDSFSSDSLKQIAIASLTGGLTAEYFDGILQTKTDPL TGKVTVDLSSLSGVGRFAANQAMQNATSTVLSQALGQGGSLNEALKSALYNSFAAAGFNFVGDIGQEYSLKPGDPSMVTMHALMGGLAAQVSGGDFATGA AAAGANEALVAKLDQAFKSLSPENREAMVTMGSQLVGVLAAAVRDPDATGKALESAAWVAKNSTQYNFLNHQDVADLDNALQKCKSQGNCRQVEEEFKAR SDENRRRLNGCVAVGNCAEIRAEIDAGSTALNELVARQETANPGGSDSDIAYGFLMGRNVVDWTTAGQLHLEQTANLWWNGNPQWQKEVGAYLDQTGFNP FGIGVPAMGGAAGKVSAKALMNALKAGELPKGEVAPGKANLPTIGALADAEAGMPYTHPIKTPSNETARLLASSQEPYKGGQSITNAGRAVTKHPEYFGF SSTQELRKMYRTDSQINELAGKAINEILQSGVKSSGAGGRYPGGWITYTLPDGRAASWGGMVNLLDLEGCKNEAKFGF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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