Strain | Pseudomonas aeruginosa BWHPSA027 genomic scaffold adgfz-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTGCGTATGGGCGAAGGCTTTCTGAGGGATATGCAAGTTTCCTCGGT AGGATTTCGCGCAAATAAACGAACGCTATTTTCCAGGCGATAGTTTCAGGTTGTCGCGGAACTCTTTTTTCAAACTTTTTGCTGCTCTGGCTTGTCCGTT TCGTATTTCATAATTTCTCATAAGTGTCTGCGTAGGCGTTTTTCGGGGGCTGTTTCAAGTGTCTTTGTTGTTAGTTTACGAGGCGAAAAAATAGTAGTTT TACTATATTAAATATCGTCGGTTTCACTAGAAAATACACATGTTCACTTTGAACCGGGGCAGTGGCGTCGGCGGATTCCGGACCGCGCTTTCCTCCTTGC CGGCCGAGCGGCGGCCGCCTGCCTGCGGCAGGCATGACCGAGACCACAGGTTTCCTGGTAACGCTTTCGCCTGCCGTGTACCGCTTAAGGAGACGCAAGG
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DNA Sequence for Gene |
>Q040_00085
ATGTCCCTACATCGCATTCGCGTAATGGTTGCGGATGATCATCCCGCCATTTCGCTGGGTATTTCCTACGAACTGAGTCAGTGCGGTTCTTTGGAGATGC TCGGTCAAGTTTCCAATTCTACCGAGTTGATCGGCCGGCTCGACGAAGGCGACTGCGATGTCGTTATCGTCGACTATACGATGCCGGGCGGGAAATATGG CGATGGACTGGCATTGTTGTCATTGCTGCGACGACGTTATCCGCATCTGCAATTGGTCGTCTTTACCATGCTGAACAATCCGGGTCTTATCCGGGCCATT CTCAAGCAGGGTATCAATTGCATCCTCAGCAAGTCCGACTCGACCAGTCACCTGCTGGCGGCGGTGAGCGCGGCCTATTCGCGAAACCAGTATTTCTCGC CGTCGATCAGGGACATCTTCGTCAACCAGGTGCTTTCCTCGCACAACGAACGGCTGACGCCCCGGGAGGCGGAAATCGTCCGTCTGTTCGGCTCCGGACT GACCATCACCGAAATCGCCGAGCGCTCGCATCGCAGCGTGCAGACCATCAGTACGCAGAAGGTCAGTGCCATGAAGAAGCTCGGCATCAAGCGCGATGCC GACCTCATCAGGTATGCGGCCGAGGGCTATTGCCGGATGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGATCGGCCCGCTTCACCAGGGCAGCGGCTGGTTCCGATAATCGACGAAGCGACAGGCATTCACGCCCGCGGCATCCTCCACCGCCGCGACCAGTCCGG CGGCGCTTTCCTCGACGCTCAGCGGCGCGCTGTCGCCGCCCATTTCGGTACGCACCCAGCCGGGATGCAGGAGCAACAGGCTGAACGGCAACTCCTCGAA CTCGCCCTCCCAGCTGCGTACCAGGCTGTTCAGCGCCGCCTTGCTGGCGCCGTAGAGCGGCATTGTGGCCGACAGGCCCAGCGCCAGGCTGGCCATCTGC GAACTCATGAACGCCACCACGCCACCCCGGCTAACCCGCCCGGACAGTGCCCTGGCCAGGCGCAGCGGCGCGATGGCGTTGGTCAGGAACAGCTGGGCGG TCTGCTCGGCGTCGATTTCCGCCACATCCTGTTGCTGCGGGCCGTAGATGCCGGCGTTGACGATCAGGCGATCGATCCGCCGCTCGCCCAGCGCCTCGCC
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Amino Acid Sequence |
>LuxR family transcriptional regulator
MSLHRIRVMVADDHPAISLGISYELSQCGSLEMLGQVSNSTELIGRLDEGDCDVVIVDYTMPGGKYGDGLALLSLLRRRYPHLQLVVFTMLNNPGLIRAI LKQGINCILSKSDSTSHLLAAVSAAYSRNQYFSPSIRDIFVNQVLSSHNERLTPREAEIVRLFGSGLTITEIAERSHRSVQTISTQKVSAMKKLGIKRDA DLIRYAAEGYCRMP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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