Pseudomonas aeruginosa PAO1, PA2252

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006865 amino acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00835
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00835
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005283 amino acid:sodium symporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00835
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006814 sodium ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00835
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00175 Sodium/alanine symporter signature IPR001463 Sodium:alanine symporter 400 420 3.8E-47
PRINTS PR00175 Sodium/alanine symporter signature IPR001463 Sodium:alanine symporter 340 362 3.8E-47
FunFam G3DSA:1.20.1740.10:FF:000004 Sodium:alanine symporter family protein - - 52 444 0.0
PRINTS PR00175 Sodium/alanine symporter signature IPR001463 Sodium:alanine symporter 294 312 3.8E-47
PANTHER PTHR30330 AGSS FAMILY TRANSPORTER, SODIUM-ALANINE IPR001463 Sodium:alanine symporter 2 448 0.0
NCBIfam TIGR00835 JCVI: amino acid carrier protein IPR001463 Sodium:alanine symporter 13 431 0.0
PRINTS PR00175 Sodium/alanine symporter signature IPR001463 Sodium:alanine symporter 203 222 3.8E-47
Gene3D G3DSA:1.20.1740.10 Amino acid/polyamine transporter I - - 52 442 4.7E-11
MobiDBLite mobidb-lite consensus disorder prediction - - 460 481 -
PRINTS PR00175 Sodium/alanine symporter signature IPR001463 Sodium:alanine symporter 84 106 3.8E-47
PRINTS PR00175 Sodium/alanine symporter signature IPR001463 Sodium:alanine symporter 175 193 3.8E-47
Pfam PF01235 Sodium:alanine symporter family IPR001463 Sodium:alanine symporter 50 444 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.