Pseudomonas aeruginosa PAO1, PA1382

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00263
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00263 Bacterial type II and III secretion system protein IPR004846 Type II/III secretion system 552 726 5.4E-45
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 548 572 1.4E-12
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 490 500 1.4E-12
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 691 709 1.4E-12
MobiDBLite mobidb-lite consensus disorder prediction - - 634 657 -
Gene3D G3DSA:3.30.1370.120 - IPR038591 NolW-like superfamily 101 268 2.1E-10
Pfam PF03958 Bacterial type II/III secretion system short domain IPR005644 NolW-like 365 490 7.0E-10
PANTHER PTHR30332 PROBABLE GENERAL SECRETION PATHWAY PROTEIN D - - 4 744 1.2E-102
Gene3D G3DSA:3.30.1370.120 - IPR038591 NolW-like superfamily 364 491 1.1E-6
PRINTS PR00811 Bacterial general secretion pathway protein D signature IPR001775 GspD/PilQ family 714 728 1.4E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.