Pseudomonas aeruginosa PAO1, PA1382
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTCCATCCTGCCATCTGCAAACCCAATGACGTCTCATGCCTTTGCTCGCTGGAATCTTCTGCTTCTGGTCGCTTCCATCTTTGCCGGACTTGTCTTTGCT CCGAGTGTCGATCTTTCCGCCTTGCCCACTCCTGAAGCCCGGAAGTGGGTTCTGGCGGAAGTTCCGTCCGTTGCGGTTGATACGACGGTTGCCGGCAAGT TGGCTGGAATGTCGTGGTGGGGGAGAACCGTGGACGAGGAGCGCGAAGCTGAATCGAAGCGGGTTTCGGTGGGCGTGGATGGAGTGGCGCTAATCAAGGT CGATTGGCTGCTACGCGGCATTGTCCGCGATGAAGGCGGCATCTTCGCCCTTGTTGCCAAAAGCGCCGAGGGACCTCTGCGGCGTTTTGCGGCGGGCGCC ACTCTGCCTGGCGGCGAGCGTCTGGAGAGCATCACTGAACAAGGAATCCGCTTCTCGTTCTCGCAGGACGGGAACACCCAGGGTTTTGAAAGGAAACTGT
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| DNA Sequence for Gene |
>PA1382
ATGCACCCTTGCCATAGGCCGAGCTTTGCCTTCTTGCGCCACCCGTTGTCCATTGTCGTCTGTCTGGCCCTATTGGCAGGTTGCAGTACTTCCCCATTGC AGTTTCCCGAACCATTGCTCGCGAAGTCGGAAAAAGCCAAGGCAACCGAGGGCGTAGCCCTGGTGAGCGACGACGGAAAGAAAGCCCCGGCATCGTTGGC TGTTCCGAAGACGGAGTTCAGTGGCACGCCCACATCGCCTCGGTCGATCGTAGGCGGTGTAGTCGATCGAATGGACAAGGCGATCCTCGACGACAAGAAG GCTGACATCAGTCTGAACGTGGAGGACGTACAGCTTGCCGCATTCATCAACGAGGTATTCGGCAACATCCTCGGTTTGCCGTTTGAGATCGAAAGCGCTC TGAAGGAAAAGACTGATCGCGTGACCGTTCGTTTGGAACAGCCGCAGACTGCACAGATGGTCTACGAAGTCGCGCGCCAGGTGCTCGTCAACTACGGCGT GGAGATACTCCACCAAGGCGATATCTATCGCTTCCAGATCAAGCAGGTAGGGCTCAGCCCGGACGAGCCGCCCATTCTCATCAGTGGCGAAGCACGGCCT AGCGTGCCGATTGCCTATCGGCCGGTATTTCAATTCGTGGCGTTGCACAGCGTCGACCCCAAGGATGTGATTCCCTGGTTGAACAGTGCCTACGAAAAAT CCGGCCTGAGCGTGATGGCCGATGGTGCGCGGAGTGGCTTGATGCTCAAGGGCATGTCTTCCATCGTCAACCAGGCCACCGAAGCCGTCCGCCTTCTCGA TCAACCTTTCATGCGTGGACGTCACAGCCTGCGTATCGACCCGGCCTTCGTCAGTGCTGCCGACATGGCCAGTCAACTCAAGACCGTGATTGCGGCGCAA GGCTACAGCGTCGGTATCGGCGAAGCGGTCGGCAGTATAATGCTGGTACCGCTGGAAAGTTCCAATGGCCTCATTGTCTTCGCCAACGATGGCCAACTTC TCGACTTGGTGCGCGAGTGGGCGCAGCAGGTCGACAGGGCTCCGATGGCGGTTGCCGCAGGTATCGGCGAGGAGAAGGAAGGACTGTTCTTCTACGAAGC TCGCAATACCCGTGTCACCGAACTGGCCAAGTCGTTGCGGGCATTGGTATCGGGGTTCGCCGGGGAGGGTGCCTACGGGATCACCTCCGGACTGCAAAGC AGCGCTTCCAAGCGATCTGGCGGTGGCAGGCGCGCCGGAGACGATGGTGCGGCACCGGCGGTGGCTCCCTTGCTGCAAGCCGCAGGTGCCGCCGCGTTGG TGGGGGGCGACGGTGCTAACGGTTTGCTCGGTGGCTTGGCGGCCGGTATCAGCGGCAGCGGCACCATAGTGGAGGACGAGAATCGAAACGCCATCTTGTT CCGAGGAGCGGCGCGTACCTGGCAGCAGATGCAGGGCTTGCTCCGGGAAATGGACAAGCCGGCCCGCCAGGTATTGATCGAGGTGACGGTGGCCAGCGTA AGTCTCAGCGACACCCAGGAGTTGGGCGTGGAGTGGGAGATGCTCAACGGCAGCTTCAATAGCGCGACCTCGACCGGAAGCAAGGGCAGCGCCGGGAAAG GAGGCTTCAACTACGTCATCAACACCGCCGGAGGCAATACCGCAGCCATCCAGGCAATGGCGGACAATCAACGAGTCCGGGTACTCGCCACTCCCCGTAT CTTGGTCAAGAGCGGCGAGCAGGCCAACATCAATGTCGGTCGGGATATTCCTATCCCAACGGCCCAGGTCAATGACGACAGCACCACTGCTGGAAGCACC AACCTGCGCAATGAAATTGCCTACCGCTCTACCGGCACAATTCTGAATGTCGCCCCCGTAGTCTACTCGGATAGTCGGGTCGATCTTACGGTCAGCCAGG AGTTGAGCGACAGTGGCGGTTCTTCCGGCGGCGGTGGCAAGGCCAGTGGTGGAGGAATCAGCGCTCCGGAGATTTCCAGGACGTCGCTGGAAACATCGCT TACGTTGAAAAGCGGTGGGTCGGTGCTGATGGGGGGGCTGATTCGGGACAACATAACGGACTCCAACGCTGGCGTGCCTCTCCTGAAGGACATTCCCGGG ATCGGTTTCCTCTTCGGACGCCAGAAAGCCGTGAAGACCCGTGAAGAAGTCATCATGTTGATCCAGCCTTACGTGCTGGAAAGTGATGCCGATGCCAGGG AAGTGACGGAAAAGCTGCACGCCATGCTGAGCAAGACACTGGCCTGCTCCGATAGACCGGGCGCCTGCCGTATGGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCGGTCGCCTGCAACACTCATCTAGACGACTCTCGTCGTGCTTCCCGATAGGCCTGGAACTTTCCGGGCCGTATCCATCCATAAAAATCTATTGCGAA TCTTCTTTCTAAATGCTCAGAAGTAGCCTTTTACTTCTGGGTGTGACCCGGTTTTTAGAAACGTTTGTTCGTGATCGCTTGGATATTCTTAAGAATTTTC TCTATTTTACAGTTTTTATTTTTACCTTCTTCCGTAGGAAAATTCATTTATTAAATGGGAAGAGGTGAAAACGCACTTTTTGCTATTGCTGAGGTGCTTT GGCAATTATATAAAGCCATCCGTTGGTGCCTGTGTGGCCACTTCATGTAGTGGCTGGGCGTCAATTCGATCGGTGTCACCGGAATGATTGGAAGTATTCA TGGTGTCAGGCCTGTCGATGTGTTGGTTGATTACCGATACATGATCATTAGCGTGTCGTCCAAAGATGGACACTTGACTGGAATGCTCAATATAAACGCT
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| Amino Acid Sequence |
>probable type II secretion system protein
MHPCHRPSFAFLRHPLSIVVCLALLAGCSTSPLQFPEPLLAKSEKAKATEGVALVSDDGKKAPASLAVPKTEFSGTPTSPRSIVGGVVDRMDKAILDDKK ADISLNVEDVQLAAFINEVFGNILGLPFEIESALKEKTDRVTVRLEQPQTAQMVYEVARQVLVNYGVEILHQGDIYRFQIKQVGLSPDEPPILISGEARP SVPIAYRPVFQFVALHSVDPKDVIPWLNSAYEKSGLSVMADGARSGLMLKGMSSIVNQATEAVRLLDQPFMRGRHSLRIDPAFVSAADMASQLKTVIAAQ GYSVGIGEAVGSIMLVPLESSNGLIVFANDGQLLDLVREWAQQVDRAPMAVAAGIGEEKEGLFFYEARNTRVTELAKSLRALVSGFAGEGAYGITSGLQS SASKRSGGGRRAGDDGAAPAVAPLLQAAGAAALVGGDGANGLLGGLAAGISGSGTIVEDENRNAILFRGAARTWQQMQGLLREMDKPARQVLIEVTVASV SLSDTQELGVEWEMLNGSFNSATSTGSKGSAGKGGFNYVINTAGGNTAAIQAMADNQRVRVLATPRILVKSGEQANINVGRDIPIPTAQVNDDSTTAGST NLRNEIAYRSTGTILNVAPVVYSDSRVDLTVSQELSDSGGSSGGGGKASGGGISAPEISRTSLETSLTLKSGGSVLMGGLIRDNITDSNAGVPLLKDIPG IGFLFGRQKAVKTREEVIMLIQPYVLESDADAREVTEKLHAMLSKTLACSDRPGACRME
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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