Pseudomonas aeruginosa PAO1, PA1092 (fliC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0071973 bacterial-type flagellum-dependent cell motility
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 9423837 Reviewed by curator
Molecular Function GO:0005198 structural molecule activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42792
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009288 bacterial-type flagellum
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42792
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Motility & Attachment Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00207 Flagellin signature IPR001029 Flagellin, N-terminal domain 111 134 1.4E-23
Coils Coil Coil - - 109 129 -
PANTHER PTHR42792 FLAGELLIN IPR001492 Flagellin 4 270 1.2E-97
Gene3D G3DSA:2.170.280.10 f41 fragment of flagellin, middle domain - - 178 395 5.6E-85
Gene3D G3DSA:6.10.10.10 - IPR042187 Flagellin, C-terminal domain, subdomain 2 440 488 1.7E-23
Gene3D G3DSA:6.10.280.190 - - - 2 60 3.6E-7
PRINTS PR00207 Flagellin signature IPR001029 Flagellin, N-terminal domain 37 54 1.4E-23
Gene3D G3DSA:1.20.1330.10 - - - 61 439 5.6E-85
Pfam PF00669 Bacterial flagellin N-terminal helical region IPR001029 Flagellin, N-terminal domain 5 141 8.7E-43
SUPERFAMILY SSF64518 Phase 1 flagellin - - 1 488 2.62E-105
Gene3D G3DSA:2.30.220.10 - - - 194 286 5.6E-85
Pfam PF00700 Bacterial flagellin C-terminal helical region IPR046358 Flagellin, C-terminal domain 403 487 3.2E-26
PRINTS PR00207 Flagellin signature IPR001029 Flagellin, N-terminal domain 76 95 1.4E-23
Pfam PF07196 Flagellin hook IN motif IPR010810 Flagellin hook, IN motif 251 303 5.2E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.