Pseudomonas aeruginosa C40, Q087_00292
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa C40
GCF_000480475.1|latest |
| Locus Tag |
Q087_00292
|
| Name |
|
| Replicon | scaffold_1 |
| Genomic location | 312607 - 313632 (+ strand) |
Cross-References
| RefSeq | WP_003093184.1 |
| GI | 489183746 |
| NCBI Locus Tag | Q087_00292 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative lipoprotein, rlpA family
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 13.37 |
| Kyte-Doolittle Hydrophobicity Value | -0.211 |
| Molecular Weight (kDa) | 36.4 |
| Isoelectric Point (pI) | 10.10 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6I09 | CELL CYCLE | 10/25/18 | Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with denuded glycan obtained by soaking | Pseudomonas aeruginosa | 1.48 | X-RAY DIFFRACTION | 100.0 |
| 6I0N | CELL CYCLE | 10/26/18 | Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with denuded glycan ended in anhNAM | Pseudomonas aeruginosa | 1.4 | X-RAY DIFFRACTION | 100.0 |
| 6I05 | CELL CYCLE | 10/25/18 | Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.213 | X-RAY DIFFRACTION | 100.0 |
| 6I0A | CELL CYCLE | 10/25/18 | Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with nuded glycan obtained by co-crystallization | Pseudomonas aeruginosa | 1.3 | X-RAY DIFFRACTION | 100.0 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001683 (530 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Q087_00292
Search term: putative lipoprotein, rlpA family
|
Human Homologs
References
No references are associated with this feature.