Pseudomonas sp. MOIL14HWK12:I2, PSK12I2_RS0122275
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MOIL14HWK12:I2 PsK12I2DRAFT_scaffold_2.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTGTTCCGCTTCAAGGACGAGGCCGAGGTCATCGAACTGGCCAACGACACCGAATTCGGCCTGGCCTCCTACTTCTATGCCCGCGACCTGTCCCGCGT GTTCCGCGTGGCCGAGGCGCTGGAGTACGGCATGGTCGGCATCAACACCGGCCTGATCTCCAACGAAGTCGCCCCCTTCGGCGGCGTCAAGGCCTCGGGC CTGGGCCGCGAAGGCTCCAAGTACGGCATCGAGGAATACCTGGAGATCAAGTACCTCTGCCTGGGCGTCTGATCGCCCTCGTTGGGCTTCGCTGCGCTCA ACCCAACCCAACCTACCAGCACCCGTAGGTTGGACGAGACGGCGCCATCGTCGAAGCCCGACAGACCCTCAGCCTGACCCAAAGCTTTCCCCCGGCGCGG ACGCCGGGCCGTTGGCAGTCGATCATCGTATGCTGCCCGGAATCCGGTCCGCGCCTTTCCCGTAGCCGGCCGCCACGATGAGCGGCCATCGAGGACTGCA
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| DNA Sequence for Gene |
>PSK12I2_RS0122275
ATGAGCCACACCAATGATTCCCTGATGCACCGCCGCAGCGCCGCCGTCGCTCGTGGCGTCGGCCAGACCCACCCGATCTTCGTCGCCCGCGCGGAGAACG CCAAGGTCTGGGACGTCGAGGGCAACGAGTTCCTGGACTTCGCCGGCGGCATCGCCGTGCTCAACACCGGCCACCTGCATCCGCGCGTGGTGGCGGCCGT GCAGGAGCAGCTGACCAAGGTCTCCCACACCTGCTTCCAGGTGCTGGCCTACGAGCCCTATGTCGAGGTTTGCGAAAAGCTCAACGAACTGGTGCCGGGC AACTTCCCAAAAAAGACCGCGCTGTTCAACTCCGGCTCCGAAGCCGTGGAGAACGCCGTCAAGATCGCCCGCGCCGCCACCCAGCGTGCTGGCGTCATCG CCTTCTCCAGCGCCTACCACGGCCGCACCATGATGACCCTGTCGCTGACCGGCAAGGTCGCGCCCTACTCGGCCGGCATGGGCCTGATGCCCGGCGGCGT CTATCGCGCGCTTTACCCCTGCGAACTGCATGGCATCAGCGTCGATGACGCCATCGCCAGCGTCGAGCGCATCTTCAAGAACGATGCCGCCCCCGGCGAC ATCGCCGCCATCATCCTCGAGCCGGTGCAGGGCGAGGGCGGCTTCTATGCCGCGCCCAAGGAATTCATGCAGCGCCTGCGCACCCTGTGCGACACCCACG GCATCCTGCTGATCGCCGATGAAGTCCAGTCCGGTGCCGGCCGGACCGGCACCTTCTTCGCCATGGAGCAGATGGGCGTCGACGCCGACCTGGTGACCTT CGCCAAGTCCATCGCCGGCGGCTTCCCGCTGTCGGGCGTGACCGGTCGCGCCACGGTGATGGATGCCGTCACCCCCGGCGGCCTGGGTGGCACCTACGCC GGCAGCCCCATCGCCTGCGCCGCAGCCCTGGCGGTGATCGAGACCTTCAAGGAAGAGAACCTGCTGGATCGCTCCAAGGCCGTGGGCGAGCGCCTCACCG CCGGTCTGCGCGAACTGGCCGCCCAGCACGCGCAGATCTGCGACGTCCGTGGCCTGGGCGCCATGATCGCCATGGAGCTGGGCAAGGGCGGCGACATCGA GCAGCCCGATGCCGAGCTGACCAGTCAGATCGTGGTCCGGGCGCGTCAGAAGGGCCTGATCCTGCTCAGCTGCGGCAGCTACGGCAACGTGCTGCGCATC CTGGTGCCCCTGACCGCCAGCGACGAAGAGCTGGATCGCGGCTTGGCCATTATCGGCGAGTGTTTTGCCGAATTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCCTGCCTAAACCGCCCTCCCGGAGGGCGGTTTTTTTGTGACACGCTTGGCACAAACCTCGCTTTGCCGCATCATCCGCCGCTTCGCTTTCCTCAAGCA GGAGTGGGTTGGGATGCCGCCCCTGATACTCATCGTAGACGCCAATCCCTGGACCCGTGACCTGCTCAAGTCGCTGGTGCTGGCCGTGCGTGCCGATGCC CTGGTGCATGAATACGGCCATGGCTATCAGGCCCTCGCCGAACTGGATCAGCGCAAGAGATGCGCCTTGATCATCGTCGAGCGACCGGCCGATTGCGACG GCCTCGACCTGTTGCGGCGCATTCGCCAGCGCGGCGCCCAGCCGCTGCAGCCGGTGATCCTGCTGTCCGACCATTCCGATGCCGCCTATGTGCGCGCCGC CCTGCGTCTGGCACCAACGGCCTATCTGGTCAAACCCTATGCGGCGGAAGAGGTGTTGCGCCGCCTGCACAGTCTGTTGCCGCCCGCGGGAGACGCCTCT
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| Amino Acid Sequence |
>4-aminobutyrate aminotransferase
MSHTNDSLMHRRSAAVARGVGQTHPIFVARAENAKVWDVEGNEFLDFAGGIAVLNTGHLHPRVVAAVQEQLTKVSHTCFQVLAYEPYVEVCEKLNELVPG NFPKKTALFNSGSEAVENAVKIARAATQRAGVIAFSSAYHGRTMMTLSLTGKVAPYSAGMGLMPGGVYRALYPCELHGISVDDAIASVERIFKNDAAPGD IAAIILEPVQGEGGFYAAPKEFMQRLRTLCDTHGILLIADEVQSGAGRTGTFFAMEQMGVDADLVTFAKSIAGGFPLSGVTGRATVMDAVTPGGLGGTYA GSPIACAAALAVIETFKEENLLDRSKAVGERLTAGLRELAAQHAQICDVRGLGAMIAMELGKGGDIEQPDAELTSQIVVRARQKGLILLSCGSYGNVLRI LVPLTASDEELDRGLAIIGECFAELA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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