Pseudomonas oleovorans MOIL14HWK12, PSOK12_RS0117060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oleovorans MOIL14HWK12 PsoK12DRAFT_scaffold_1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCGCGCCAAGGAAGCCGGCAACGGCGTGGTGGTGGACTGGCGTCTGCCACGCGAGGGCGCGCCCATCTGGTTCGACACCTGGGCCATTCCGGCCAGTGC GGCCAATGTCGACCAGGCCCATGCCTTCATCAACTACCTGCTCGAGCCCAAGGTGATCGCCGGGATCAGCGATTACCTCGGCTACCCCAACGCCAACAAG CCGGGCATGCCGCTGGTGACCGCCGCCATCCGCGACAACCACGACCTGGTGCCCACCCCGGAGATGCTCAAGAAGCTCTATGTGGTGCAGCCGCTGCCGC AGCCCATCGAGCGGGTCCGCACCCGTGCCTGGAGTCGTATCAAGGCCGGTAATTGAAGGTCGAGTCCTCCACGATCATCCGAATGGTAGCCAATGGCTAC CATTCGGCGGTTACATCCCCGCGTCCGGGAACCCTCTATCGCGCTAAGGGACTTATTGTGCTGAAGTGACCCATTGGATTTACCTGCCAGGTACGGCGTC
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| DNA Sequence for Gene |
>PSOK12_RS0117060
ATGTCCCTCAGTCTCGCCCTCACCCGAGCGCTGGCTCGGCCTTTCTGGGCCCTGCGCTTCGAACCGGTATTGGAACGGCATTACCAGCACGACATCGCCC GTTCGCGCCGGCGGCACCTGCGCATCAGCCTGACCGTGGCCATCCTCGCCTACGCCAGCTTCTCGATCTGGGACTGGATCCTGATGACCGATGCCTTCTG GCTCATCAGCCTGCTCAGCGCGCTGGTGGTGATCGGCGGCGGGCTGGTATTGCTGGCGCTCGGGTTGATACGTGCCGAACATCCCGCGCGCGAGTGGCTG GGCATCCTGCCCTGTCTGCTGGCCTATCTCCCGCCGCTGCTCGACGTCGAGGCCACCGATGCCGCGCATCGCGCCCTCTGGCTGGCGACCATGCCGCTGA TGACGCTCTTCACCAACAGCTGCATCGCGCCGCCCCTGCGCCAGGCCGCGGTCCACACCCTGATCGCCCTGCTGGCCATCGGCCTGGCCACCCAGATGCA TACCCTGCCGGCCCTGGAGGCGTCGCTGGTCATGACCCTGGCGTTCGCCACCGCGAGCTTTACCCTGCTCAACAACTTCTGGATGGAGCGCGCCCGCCGT CAGGGCTATCTGCTGATCCTGCGCGACCGCTTGCGCAACGAAGAGCTGACCGCCTCCAACCGCTTCCTGGCGCAGCAATCCGCCACCGATCCCCTGACCG GCGTGGCCAATCGCCGGGCGCTGATGCAGGCCCTGGCCACCGCCCTGGCCCATCCCCCGCCCCGGCCGCTGCTCCTGCTGATGATCGACGTCGATCACTT CAAGGCCTTCAATGACCGCTATGGGCATCCGGCGGGCGATCGCTGCCTGCAACAGGTCGCCAGCGCCCTGGCCGACGAATTGCGCGCCGGCGATTGCCTG GCCCGCTACGGCGGCGAGGAATTCGCCATCCTCTGCACGCCGTCGCGCGAAGAGGATGCCGCCAAGCTGGCGCAGCGCCTGCTCGACGCGGTACGGCGCC TGGAGATCCCCCACCTCGGGCCCCAGGCCGGTCCGCGGGTGACCGTGAGCATTGGCGGCGCCTGTGCGCGGCCGGATCACGACTCTGCCGAGAGCTTTAT CGAAGCCGCCGATCGCCAGCTCTACTGGGCCAAGCAGGCCGGGCGCGACCGCGCCATCCTCGAGGACTGCGATCGCTGCCACCCAGCGATGGAGGAATCC CTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCAGGCGATAGACCCGATCGATCAGGACCACGCTGGCCAGGCGCTGGCGCAGATCGTCGTCCAGGCTGGGATCCTGCCAGTCGTAGAGGCCGATGCGGG CATAGGCCCGCCCCCGCGGCGGGCGGGTGCCCAGGTACTCCCAGACCACCCGGGTGCAGGCCGGCTCGCGCCGGTCGGAGGCGCTGACGCCCAGCTTGAG TCCGTTGAGGCGATCGATGCGGTTGCGCGCGCTGGGCAGCAGCACCGTCTGCGACAGCTCGTTGCCGGTGAGGGATTCGTAGTCGGTAAAGAACAGCCGG CTTTCCAGGCTCATGGCCAGGCCCAGGTAGCGAAAGCGTGCCTGGCTGGTGGTCTCGCCGCGGCGACGCAGGCGCTCGAAGCGCACATAGCGGAAGACAC CCGCTTCCGCGAACAGCCAGACCAGTCCGCAGAGCACCACGCCCGGCGTGGACAGCGACGGATAGTATTCGTGGTAGTAGCCCTGGTAGCGCGCCAGGCC
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| Amino Acid Sequence |
>diguanylate cyclase
MSLSLALTRALARPFWALRFEPVLERHYQHDIARSRRRHLRISLTVAILAYASFSIWDWILMTDAFWLISLLSALVVIGGGLVLLALGLIRAEHPAREWL GILPCLLAYLPPLLDVEATDAAHRALWLATMPLMTLFTNSCIAPPLRQAAVHTLIALLAIGLATQMHTLPALEASLVMTLAFATASFTLLNNFWMERARR QGYLLILRDRLRNEELTASNRFLAQQSATDPLTGVANRRALMQALATALAHPPPRPLLLLMIDVDHFKAFNDRYGHPAGDRCLQQVASALADELRAGDCL ARYGGEEFAILCTPSREEDAAKLAQRLLDAVRRLEIPHLGPQAGPRVTVSIGGACARPDHDSAESFIEAADRQLYWAKQAGRDRAILEDCDRCHPAMEES L
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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