Pseudomonas oleovorans MOIL14HWK12, PSOK12_RS0116000
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oleovorans MOIL14HWK12 PsoK12DRAFT_scaffold_1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCAACCTGCTGAAGAAGATGAGTTTTCCTCGGATCACCTTGCCTGTGATCGTGATGGGATCAAGCCTGCTCAACTACGTGCTGCTCTTCGGTGCTTTGC TGGTGGTGTTCGCCTTTTTCGGCAAATTTCCTGATCTGCTCATGTTATGGCTCATACCCCTGACCCTTGCCATCTTGGCGCTTGCTGTCGGAATCGGTCT GATTCTTGGCGTGCTCAACGTGTTCGTTCGTGATGTCGGCCAGGTCGTGCCCATCGTGCTCCAGGTGTGGTTCTGGTTCACCCCAATCGTCTATCCCGCC AACATCATTCCTGAGTATCTCAAGGGCTTCATGGGTAACAATCCCTTGTTTCCTATCATCACTGGTTATCATGACGTATTGGTTTACGCGCGCGCGCCCG ATCTGCTGCAGATCTATCCCTCCTGCTTGATCGCTTGCGGCCTCCTCCTGCTTGGCCTACTCATGTTCCGCCGCGCGGCGCCGGAAATGGCGGATGTACT
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| DNA Sequence for Gene |
>PSOK12_RS0116000
ATGAGCTTGCTCAGTGTTTCCGGCCTCGGGAAATCCTATCGTTCCTATCGTTCTGAGTGGCTCCGCTTCGCGCGCTGGCTCTACCTTCCGGTCAAGCCCA GTGCTGAAAACTGGATCATTCGGCACATCAATTTCTCGATAGAGCCTGGTGAGGCTATTGGCATCGTTGGGCAGAATGGTGCTGGCAAATCCACGCTGCT CAAAATGATCACCGGTACGCTCCAACCTAGCGAGGGCACCGTGACGTGTCGCGGGCGAATTGCCGCCATCCTCGAACTGGGTATGGGCTTCAACCCTGAG CTGACCGGAAGGCAGAACGCCTATCATGCGGCCGGCCTGATGGGGTTCAGCAAAGAACAGATCGATTCAGTTATCGATTGGATTGATAGCTTTGCCGAGA TTGGATCCTATTTCGATGCGCCCGTCCGTACCTATTCAAGCGGTATGCAGATGCGAGTGGCTTTTGCCGTGGCCACTGCCTTTCGGCCGGAAATCCTCAT CATCGACGAGGCCTTGTCAGTCGGCGACGGCTATTTCCAGCACAAGAGTTTCGACCGCATCCGCGAGTTCCAGCAACAAGGCACCACACTGCTGATTGTC TCTCACGATCGTAGTGCGATTCAGGCTCTATGCAGCCGTGCCGTTTTGCTCGACAAAGGGACCATCATCAAAGATGGGAATCCTGAAGAAGTAATGGATT TCTATAACGCGCTGATTGCCGAAAAGGAAGGTACTAGCGTCACCGTGCAACACCTCGACAATGGCCGGGTACAGACGCGCTCTGGCAGTGGCGAGGCCAG CATCCTTGCAGTCGATGTCTTCAATTCCGCCGAGCAGCCGGCGGAATTCATCCGGGTAGGCGAAATCGCTTCATTGCGCATTAAGGTGGCGGTCTCGGTG GCACTCCCCGAGTTGGTGGTGGGCTACATGATCAAGGATCGTCTCGGGCAATCCGTCTATGGCACCAATACCCATCACCTGGGATGCAAACTCGAGGCGC TCGAAGCGGATACGGAGATCGAGTATCGCTTCAACTTTGCAATGAACCTTGGTGTTGGCTCCTATTCGGTTGCCGTTGCCCTCCATACGGCCGATACCCA TCTGGCGCAAAACTACGAGTGGCGCGACTTGGCCGCGGTGTTCAACGTCGTGAACATGGACCGCGAGGAATTCGTCGGCCTGACCTGGATGCCACCTGAA GTGGAGCTCGTGCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGAAATTTTTACCGTGCTTTCGAAGATCGACATCGCGGCTCCCGCGCGCTGATCAAGCAACGCCTTCGCGTATATGAACCCTTCCTGCAGGCGCTTAA GGAAGCCGATGAAGCCTGTCCGGCACTCGATATCGGATGTGGTCGTGGCGAGTGGCTTGAACTGCTGATCGAGCAGGGCTTCCAGGCCCAGGGGGTCGAC CTCGACGACGGTATGCTCCAGGCCTGTCGCGACAGAGGACTGCCAGCAGTTCAGGGCGATGCCTTGAGTGCATTGCAAGTGCTGCCGGCGGAGAGTCAGA TCCTCATTTCTGGTTTTCACATCGTCGAGCACATACCCTTCTCGGTACTTCAAGAGCTGGTAAGTGAAGCGCTGCGCGTCCTCAAGCCTGGAGGGCTGCT GATTCTTGAGACGCCGAATGCGGAAAATTTGGTAGTGGGGACCAACAGCTTCTATCTCGACCCTACCCACGAGCGCCCGCTTCCTCATCAATTGCTCAAG
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| Amino Acid Sequence |
>sugar ABC transporter ATP-binding protein
MSLLSVSGLGKSYRSYRSEWLRFARWLYLPVKPSAENWIIRHINFSIEPGEAIGIVGQNGAGKSTLLKMITGTLQPSEGTVTCRGRIAAILELGMGFNPE LTGRQNAYHAAGLMGFSKEQIDSVIDWIDSFAEIGSYFDAPVRTYSSGMQMRVAFAVATAFRPEILIIDEALSVGDGYFQHKSFDRIREFQQQGTTLLIV SHDRSAIQALCSRAVLLDKGTIIKDGNPEEVMDFYNALIAEKEGTSVTVQHLDNGRVQTRSGSGEASILAVDVFNSAEQPAEFIRVGEIASLRIKVAVSV ALPELVVGYMIKDRLGQSVYGTNTHHLGCKLEALEADTEIEYRFNFAMNLGVGSYSVAVALHTADTHLAQNYEWRDLAAVFNVVNMDREEFVGLTWMPPE VELVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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