Pseudomonas oleovorans MOIL14HWK12, PSOK12_RS0103410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oleovorans MOIL14HWK12 PsoK12DRAFT_scaffold_3.4_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGACCCACGTCCCCAGTTTCACTCCGCTCGAACAAGCGTCCTGAGTGTCCTGAGGCGGGCGATTCAATCTAGTAGGAAATTTTCATGGCTCGAATTCTG ATCGTCGACGACTCTCCCACCGAGATGTACAAGCTCACCGCCATGCTGGAAAAGCATGGGCATCAGGTGCTCAAGGCCGAGAACGGTGCCGACGGCGTCG CCCTGGCCCGCCAGGAGAAGCCGGACGCGGTGCTGATGGATATCGTCATGCCCGGCCTCAATGGCTTCCAGGCCACCCGGCAGCTGACCAAGGATGCCGA GACCAGCCACATCCCGGTGGTCATCGTCACCACCAAGGACCAGGAAACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCCAAGGACTACCTCACCAAGCCC ATCGACGAAGACACCCTGCTGCGCACCCTGGCGGGTGTCCTGCAAGGCTGAGGTCTTTCGTCCGTTTCTCGCGGCAGCGCCCCACTGGGCAGGGAATCCT
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| DNA Sequence for Gene |
>PSOK12_RS0103410
ATGAGCGACGCCACCACGCCCTACGAACTCTTGCGCCTGATCGATCTGCGCTGCCGCGAGCGGGCGGCCGGCCTGCCGGCGCAGCAGGAAAACCAGCGCA GCTGGAGCGGTATCGGCTTTCGCCTCGGTGAATTGCGCTTCGTGATTCCCATGGGCGAGGTCAGCGAGATCCTGCCGGAGCCGCGCTTCACCGCGCTGCC CGGCGTCAAGCCGTGGCTCAAGGGCGTGGCCAACGTGCGTGGTCGCCTGCTGCCGATCGCCGACCTGGGGCAATTCCTCGGCGTGAAGATCCAGGCCCTG CGCAAACAGCGGCGCATCCTGATCGTCGACCATGGCGACCTCTTCGTCGGGTTGGCGGTTGACGAAGTCCTGGGGATGCAGCATTTCGACATCGAGGCCT ATCGCGAGCACGCCGACAGCGTGCCGGCGGGCCTGCACTTCTTTCTGGAAGGTGTCTTCCAACGCGACGTGCCCTGGCTGGTCTGCAGCCCGCGCGCCTT GGTCGAGCATCCCGAGTTCATGGACGTCGCGGCCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGGTCGGAGGTCCGGACGCTGCAAGGCGGATCGGGGTCGGGATGGCAGGAGCCGTCGCCGACGGGTGGGGGTAGGGCGACGAGCACCGGCTTCAAGCAA ACCGGTCCGGCGTCCGACAAGGATAGAACTAAAGGAACCAAGGTCCAGGCGGGGGCCGCTGATGAACAAACTCAATACCGGGAAACTCAACGCGTGGGTC GCGGGCATGTTCGTGGTGCTGATCGTCGCGATCGTGCTGCTGTTCGCCAACTTCGCGTACCTGGGCACCCAGACCAACTACGATAACCAGTATCAGGGCC AGGCTACCGAGCTGCGCATCCTCTCGCAGCAGCTGGCCAAGAGCGCCAGTGAGGCCGCGACCGGCAAGGCCGACGCCTTCAAGGACCTGCGCCAGGCCCG TGCCGAATTCGAGCGCCGCCTGAACATCCTGCGCAGCGGCGATCCGCAGACCGGTCTGCCGGCGTCGCCGGCGATCCTCCGTCCGCGGCTGGACACCCTG
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| Amino Acid Sequence |
>protein PilI
MSDATTPYELLRLIDLRCRERAAGLPAQQENQRSWSGIGFRLGELRFVIPMGEVSEILPEPRFTALPGVKPWLKGVANVRGRLLPIADLGQFLGVKIQAL RKQRRILIVDHGDLFVGLAVDEVLGMQHFDIEAYREHADSVPAGLHFFLEGVFQRDVPWLVCSPRALVEHPEFMDVAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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