Pseudomonas thermotolerans J53, M905_RS0114600
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_30.31_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCAGGAGGGCGCCCGCCTGCTGATCGGCGGCGAGCGGGTCACCGAGGGCGAGTTCGCCAAGGGCGCCTACGTCGCGCCCACGGTGTTCACCGACTGCCGC GACGACATGACCATCGTCCGCGAGGAAATCTTCGGCCCGGTGATGAGCATCCTCATCTACGACGACGAGGAGGAAGTCATCCGCCGCGCCAACGACACCG ACTACGGCCTGGCCGCCGGCGTGGTGACCCGCGACCTGGCCCGCGCCCACCGGATGATCCACCGCCTGGAAGCCGGCATCTGCTGGATCAACACCTGGGG CGAGTCGCCCGCGGAAATGCCGGTCGGCGGCTACAAGCAGTCCGGCGTCGGCCGCGAGAACGGTCTCGTCACCCTCGCCCACTACACCCGCATCAAGTCG GTGCAGGTCGAGCTGGGCGACTACGCCAGCGTCTTCTGAACCGAACCGCCCACAGCCAGCGGCAGGCCGGCGCCTGCCGCCCTACCTCAGGTGTCGCTCC
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| DNA Sequence for Gene |
>M905_RS0114600
ATGGAATACGACTACATCATCATCGGTGCCGGCTCCGCCGGTAACGTCCTGGCCACCCGCCTGACCGAAGACGCCGACGTCAGCGTGCTGCTGCTGGAAG CCGGCGGCCCGGACTACCGCCTCGACTTCCGCACCCAGATGCCCGCCGCCCTCGCCTATCCGCTGCAGGGCCGCCGCTACAACTGGGCCTACGAGACCGA TCCCGAGCCCTTCATGAACAACCGCCGCATGGAATGCGGGCGCGGCAAGGGCCTGGGTGGCTCCTCGCTGATCAACGGCATGTGCTACATCCGCGGCAAC GCTCTGGACTTCGACAACTGGGCCAAGGCACCGGGTCTGGAGGACTGGAGCTACCTGGACTGCCTGCCTTACTTCCGCAAGGCCGAAACCCGCGACATCG GCCCCAACGAATACCACGGCGGCGACGGTCCGGTTTCCGTGACCACCCCTAAGACGGGCAACAACCCGCTGTTCCACGCCATGGTCGAAGCCGGCGTGCA GGCCGGCTACCCGCGCACCGACGACCTCAACGGCTACCAGCAGGAAGGCTTCGGACCGATGGACCGCACCGTGACTCCGCACGGACGGCGCTCCAGCACT GCGCGTGGCTACCTGGACCAGGCCCGCCAGCGGTCGAACCTGACCATCGTCACCCATGCCCTCACCGACCGCATCCTGTTCAGCGGCAAGCGCGCCATCG GCGTCGAATACCTGCACGGCTCCGGCAACCGGCCGGTGACCGTCCACGCCCGCCGCGAGGTGCTGCTCTGCGCCGGAGCCATCGCCTCCCCGCAGATCCT CCAGCGCTCCGGCGTCGGCCCCTCTGACCTGCTGCGCGACCTGGGGATCCCGGTGGTCCACGACCTGCCGGGAGTCGGCGCCAACCTCCAGGACCACCTG GAGATGTACCTGCAGTACGCCTGCAAGCAGCCGGTGTCCCTCTACCCTGCCCTGCAATGGTGGAACCAGCCGCCCATCGGCCTGGAGTGGCTGCTGCACG GCAAGGGCCTGGGCGCCAGCAACCACTTCGAGGCCGGCGGCTTCATCCGCACCCGGCCGGAGTTCGCCTGGCCGAACATCCAGTTCCACTTCCTGCCGGT GGCGATCAACTACAACGGCAGCAACGCGGTGAAGGAGCACGGCTTCCAGGCCCACGTCGGCTCCATGCGCTCGCCGAGCCGCGGCCGCATCCGCCTGAAG TCCCGCGACCCGCGCCAGCACCCGAGCATCCTGTTCAACTACATGTCCACCGAGCAGGACTGGCAGGAATTTCGCGACGCCATCCGCATCACCCGCGAGA TCATGGCCCAGCCGGCCCTGGACCCGTTCCGCGGCCGCGAGCTCAGCCCCGGAGCCCACTGCCAGACCGACGCCGAGCTGGACGCCTTCGTGCGCAAGCA CGCGGAAACCGCCTTCCACCCCTCCTGCTCGTGCAAGATGGGCAGCGACGACATGGCGGTGGTCGACGGCCAGGGCCGGGTACACGGCATGCAAGGGCTA CGGGTGATCGACGCGTCGATCATGCCGGAAATCATCACCGGCAACCTCAACGCCACCACCATCATGATCGCCGAGAAGCTCGCGGACCGGATCCGCGGCC GCCAGCCGCTGCCGCGCAGCAGCGCACCCTACTACGTGGCCAACGGTGCCCCGGTGCGCGGCGAGCCGGTGCGCGCACTGAGCGACAAGAAGCTGCCGCT GCCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCCAGAGCGCGGGGGGCTCGCCGCCAGGCAGCCCCCTGCGCCGCTCCCTCACTTCAGCCCCAGCAAGCCGGCGCAGAGCAGCAGGAAGGCGCAGAAC AGCACGCGCAGCAGACGCTCCGGCAGGGCATGGGCAAGGCGCACGCCCCAGCTGATGCTGAGCAGGCCGCCCAACGCCAGGGGCACGCCCATCCACCAGT TCACGTGGCCGTACAGTGCGTAGGTGAGCAACGTCACCGCGGTGCCCGGCAGCGCCAGGGACAGCGATAGTCCCTGGGCCACCACCTGACTGGCGCCGAA CAGGCTGGTCAGCACCGGCGTGGCCACCACCGCGCCGCCCACCCCGAACAGACCGCCGAGGGCACCGGACACGCCGCCCAGGGGAGCGAACCAGCCCCAG TGATGGCGCAAGCCGCCCGCCCCCGTGGTCGGAGCCAGGCGCAGCCGAGCCAGGTTGTAGGCGGCCAGCACCAGCAGGAAGACGACGAAGGCCCAGCGCA
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| Amino Acid Sequence |
>choline dehydrogenase
MEYDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAYPLQGRRYNWAYETDPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGN ALDFDNWAKAPGLEDWSYLDCLPYFRKAETRDIGPNEYHGGDGPVSVTTPKTGNNPLFHAMVEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPHGRRSST ARGYLDQARQRSNLTIVTHALTDRILFSGKRAIGVEYLHGSGNRPVTVHARREVLLCAGAIASPQILQRSGVGPSDLLRDLGIPVVHDLPGVGANLQDHL EMYLQYACKQPVSLYPALQWWNQPPIGLEWLLHGKGLGASNHFEAGGFIRTRPEFAWPNIQFHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRIRLK SRDPRQHPSILFNYMSTEQDWQEFRDAIRITREIMAQPALDPFRGRELSPGAHCQTDAELDAFVRKHAETAFHPSCSCKMGSDDMAVVDGQGRVHGMQGL RVIDASIMPEIITGNLNATTIMIAEKLADRIRGRQPLPRSSAPYYVANGAPVRGEPVRALSDKKLPLPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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