Pseudomonas thermotolerans J53, M905_RS0114600

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019285 glycine betaine biosynthetic process from choline
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01810
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00732
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000137
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008812 choline dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01810
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05199 GMC oxidoreductase IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal 393 527 1.5E-42
PIRSF PIRSF000137 Alcohol_oxidase IPR012132 Glucose-methanol-choline oxidoreductase 1 539 0.0
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 4 525 0.0
PANTHER PTHR11552 GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE IPR012132 Glucose-methanol-choline oxidoreductase 2 539 0.0
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 1 535 9.23E-92
SUPERFAMILY SSF54373 FAD-linked reductases, C-terminal domain - - 295 477 1.37E-64
Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. IPR011533 Oxygen-dependent choline dehydrogenase 1 554 63.382919
Gene3D G3DSA:3.30.560.10 Glucose Oxidase, domain 3 - - 41 472 0.0
Pfam PF00732 GMC oxidoreductase IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal 3 300 7.0E-100
NCBIfam TIGR01810 JCVI: choline dehydrogenase IPR011533 Oxygen-dependent choline dehydrogenase 4 537 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.