Pseudomonas thermotolerans J53, M905_RS0113500
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_25.26_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCCCTCGACTGAATGCCCGCCGACTGACCGTCCGGTCGCCTTTGGAAATTTTGTAGTAGCTGAAAAAAAACACTACAAAACGTTTGACGAAGCCATTT TCCAAAGGCATGATGGCCCCGCTCCCGCTAATCAGGGGCTCCGAAAGGAGCCTCCGGGTCGCGTTCCGGTCACCCCCGAGCCGACCCGTGTTGCATGGCC CACAAGGCGATTCGACGAGGTTGCGACTGGAACGAAAGTTGTCCTGAGGGACGGGGAAGCACTCAATCAGTCAGATCGACAGCGCCGTCGAAACGCATCG CCCAACGGCATCCACGAGCCGGCAAGCGAGCACTGCACACGACGCCGAGGCCTGCCACTGTACGTCACTCTCCGCTCCGCAGACCTCATCCTTCCAGTCT CTCCTTCATCGATCAGCCGAACGCCAGGCAGCGAGCCGTCGACCGTGCGACGACTCAAGCGGAAAGTCGGGCTCAACCACTACTTTTTGAAGGATTGACC
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| DNA Sequence for Gene |
>M905_RS0113500
ATGTCCGCATATCAGAACGAGATCAAGGCAGTTGCCGCCCTGAAAGAGAAATACGGCAGCAGCTGGGGCGCCATCAACCCCGAGTACGCCGCTCGCATGC GTATCCAGAATCGTTTCAAGACCGGCCTGGACATCGCCAAGTACACCGCGGCCATCATGCGCAAGGACATGGCCGAGTACGATGCCAACCCCGCCCTGTA CACCCAGTCGCTGGGTTGCTGGCATGGCTTCATCGGTCAGCAGAAGCTGATCTCCATCAAGAAGCACCTGAAGTCCACCAACAAGCGCTACCTCTACCTG TCCGGCTGGATGGTCGCCGCCCTGCGCTCCGAGTTCGGTCCGCTGCCCGACCAGTCCATGCACGAGAAGACCGCAGTCGCCAATCTGATCGAAGAGCTCT ACACCTTCCTGCGCCAGGCCGACGCCCGTGAACTGGACCTGCTGTTCACCGCTCTGGACAAAGCCCGCGCCGCCGGCGACAAAGCCAAGGAACAGGAAAT CCTGAACCAGATCGACAACTTCGAAACTCACGTCGTGCCGATCATCGCCGACATCGACGCCGGTTTCGGCAACGCCGAGGCTACCTACCTGCTGGCCAAG AAGATGATCGAAGCTGGTGCCTGCTGCATCCAGATCGAGAACCAGGTGTCCGACGAGAAACAGTGTGGCCACCAGGACGGCAAGGTCACCGTGCCGCACG CCGACTTCCTGGCCAAGGTCAACGCAGTTCGCTACGCCTTCCTCGAGCTGGGCGTTGACGACGGCGTGATCGTCGCCCGTACCGACTCCCTGGGCGCAGG CCTCACCAAGCAGATTGCCGTCACCAACGAGCCGGGCGACTTGGGCGACCTGTACAACAGCTTCCTGGATGGCGAGTACATCGAGTCCGCCGACGACATC GCCAACGGCGACGTGGTCATCAAGGCTCAGGGCAAGCTGCTCAAGCCGAAACGCCTGCCCTCCGGCCTGTTCTGCTTCAAGCAGGGCAGCGGCGAGGACC GCGTGGTCCTGGACTGCATCACCAGCCTGCAGAACGGCGCAGACCTGCTGTGGATCGAAACCGAGAAGCCGCACATCGGTCAGATCAAGGGCATGGTGGA CCGCATCCGCGAAGTCATCCCGAACGCCAAGCTGGTCTACAACAACAGCCCGTCCTTCAACTGGACCCTGAACTTCCGCCAGCAGGTGTTCGATGCCTGG GCCGCCGAAGGCAAGGACGTGTCCGCCTACGATCGCGCCAACCTGATGAGCGTCGAGTACGACAACAGCGACCTGGCCAAGGAAGCCGACGAGCGCATCC GCACCTTCCAGCGTGACGCCTCCGCCCAGGCCGGCATCTTCCACCACCTGATCACCCTGCCGACCTACCACACTGCGGCCCTGTCCACCGACAACCTGGC CAAGGGCTACTTTGCCGAGGAAGGCATGCTGGCCTACGTGAAGGGTGTGCAGCGCCAGGAGATCCGTCAGGGCATCGCCTGCGTGAAACACCAGAACATG GCTGGTTCCGACATCGGCGACAACCACAAGGAATACTTCGCCGGCGAGGCCGCGCTGAAGGCCAGTGGCCAGAACAACACCATGAACCAGTTCCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTACAGGTTCAATCGGTCTTCGGACCAAAGGTGTCGTTGGAGAGCCCCGGCAGCAATGCCGGGGTTTTCTTTTTCCCGCCTGGAACCTTGCCAACCCTCC CTTAGCCTTCAGACCCAGCCCTGAAGCTCCGTCCCTATCACGAGACTGGCAGCCCAGAGCGCAGCCGTCACCTGCACGCTAGGCAAGTGCCCCCCCCATT GGCGCAGACCGTCGGCAACCCAGTTATCGCGACCCCGGTCGCTCACCTCCCAGCCAAACGTGAAAGAGGTCATGGGTCACTTCGGCGTTCGGGCGCTGGG CACGCACTTCCAGATCGGTGCGGTGTGCATGTCCATTGCGACCGCCTCGATATGTGTACCGCCCTCTTCGCTCGGCCATCCGAAGAAAGGCCGGATCGCC TCGCGACTGTTGCCTTCGCCCCCCCCACAGCACACGCGTGCGCTCGGCATCCAGGGTCCTACCCCATTTCCACGGACGGATTGAAAAGGGCTGAAAATTT
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| Amino Acid Sequence |
>isocitrate lyase
MSAYQNEIKAVAALKEKYGSSWGAINPEYAARMRIQNRFKTGLDIAKYTAAIMRKDMAEYDANPALYTQSLGCWHGFIGQQKLISIKKHLKSTNKRYLYL SGWMVAALRSEFGPLPDQSMHEKTAVANLIEELYTFLRQADARELDLLFTALDKARAAGDKAKEQEILNQIDNFETHVVPIIADIDAGFGNAEATYLLAK KMIEAGACCIQIENQVSDEKQCGHQDGKVTVPHADFLAKVNAVRYAFLELGVDDGVIVARTDSLGAGLTKQIAVTNEPGDLGDLYNSFLDGEYIESADDI ANGDVVIKAQGKLLKPKRLPSGLFCFKQGSGEDRVVLDCITSLQNGADLLWIETEKPHIGQIKGMVDRIREVIPNAKLVYNNSPSFNWTLNFRQQVFDAW AAEGKDVSAYDRANLMSVEYDNSDLAKEADERIRTFQRDASAQAGIFHHLITLPTYHTAALSTDNLAKGYFAEEGMLAYVKGVQRQEIRQGIACVKHQNM AGSDIGDNHKEYFAGEAALKASGQNNTMNQFH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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