Pseudomonas sp. URMO17WK12:I11, H041_RS0112825
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I11 H041DRAFT_scaffold00013.13_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGCTGTTGATCTGCTTCGACATCGAATTCCCCGAAAGCGCCCGCGCCCTGGGCCAGCTGGGCGCCGAGCTGATCTTGGTGACCAACGGCAACATGGACC CCTATGGCCCCACGCACCGCACCGCCATCAGCGCCCGCGCCATGGAAAACCAGGCCTATGCGGTCATGGTCAATCGCGTCGGCCAGGGCGATGGCAACCT GGTCTTTGCAGGCGGCAGCGCGGTGGTCGACCCTTACGGCCAACTGTTATGCGAGGCAGGGCGCACCGCCTGCCGGCTGCAACTGGACCTCGACCTGGCG CTGATCGGGCAAGCGCGCCAGGACTACAGCTACCTGGCCGAGCGCCGCTTCGAACTGCCAGGCCAGCAGGTCGAGCACCCTGACGGCTTGCGAGAACTGA TCCTGACCACCGTCTGAACCTTTGCGCCACGGCTGGCGCCCAGGGCCCAGGCCGGGCCCTGACATTGAACTCCATAAAAAACACAATCCGGAGTAACACC
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| DNA Sequence for Gene |
>H041_RS0112825
ATGGCCCACTTGAAACGCACCCTGTCGCTGGGTGCGGTGACGCTGTTCGGCATCGCCTACATGACCCCCATCATTGTGCTGGGCACCTTCGGCATCCTCG CCGACACCACCCAGGGCGCCGTGCCCTCGGCTTATCTGGCCGCCTCCATCGCCATGCTGTTCACCGCCCTGAGCTACGGCAAGATGGCCAAGGCCTTCCC CGTCGCCGGCTCGGCCTACACCTACGTGCGCAAGTCCATCAGCCCCAAGCTGGGTTTTCTGGCCGGTTGGGCGGTGCTGCTGGACTACCTGTTCCTGCCC ATGGCGATCTGGCTGATCGGCGCGGCCTACCTGCATTCGGCCTTTCCGGCGGTGCCGCACCCGGTGTGGGTGCTGGCCTTCATTGCCGTCACCACGGCCA TCAACATCATCGGCCTGCAGCTGGCCAAGACCGTCAATGGCGTGCTTATGCTGCTTCAGTTCCTCGTACTGGCAGCCTTCGTGGGCCTGGCCGTGCATTA CGCCACCGGCGAGCTGAACCAGCCGTTGTGGTCGCTGGCACCCTTTCATCAGGACGGTTTCCAGCTGCCCCTGATCATGAGTGGCGCCGCCATCGCCTGT TATTCGTTCCTGGGCTTCGATGCGGTCAGCACCTTGACCGAGGAGACCCATGAACCGCGCAAGACCATCCCTCGCGCCATCCTGCTCATCACCCTGCTGG GCGGTTTCATCTTCATCGTGGCCAGCTACTTCGTCCAACTCGCGCACCCAAGCGCGACCTTCAGCAACCCGGACTCGGCCGCCTACGAAATCGCGAAGGC CATTGGCGGGGACATTTTCGTGAGTTTCTTCCTGATCGGCCTGATCGTGGGCCAGTTCACCTCGGGGCTTTCCGCCCAAGCCAGTGCCTCGCGCCTGCTG TTCGCCATGGGCCGCGACGGTGTGCTGCCCAAGCGTTGGTTCGGGCGACTGAGTACGCGGTTCGGCACACCGGTCATCAGCATCGTCCTGTGTGGCGTAG TCGCGCTGCTGGCCTTGCGCATGGACGTGACGACCTCTACCTCGTTCATCAATTTCGGCGCTTTCCTGGCGTTCAGCCTGGTCAACCTGTCGGTGATCTT TCACTACTGGATCGCCCAGGGCGAGCGCGGGCTCAAGGCGGCAGCGGTGTACCTGGCCTTCCCCTTGGTCGGGCTGATGGCGGATCTGTGGCTGATGGCA AGCCTGGACCCCATGGCCATCTACCTTGGCGTGGCTTGGCTGGGCATGGGGTGCCTGTACCTGCTGGTCATCACCCGTGGGTTGCGCCAACAGCCGCCAG AGATGCATTTCGAGGAGGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCGAGTGGGCAGTATGATTTGCGGGGCTTGGAGATATGCCCCGCAGGGCTTGGGTCAGGGTGGGGATCGGATGATTGCGGCCAGTGCGAAATCTGGAA AACTCGGTGGCGTTCTTCGCAGCTGGAATTCTATGAGGCTTCCGGCCGTCGACGGATAACAAATGCGTAATGGCATGGATCTTTATAACCGTTGGCATTC GTGGTTCGGCGATTGGGTTGCTCGCGATTTCGTGCGGGGCCCAAGGCCGTTCTCTAACACCTGTCAGTTTTGCCAGTGGCCGGGTGCGTACATCACCCGG ATACTCAAGACGCCCGCCCTGCTAACGGGCGAAACGACAGTTCTCCAACCGCGAGCACAATCGCATGAACAGACTCGAGAGATCGGCGTACTCGCCTTAC GGCTTTGCCGCAGAGATTCGATCTGCACACACGTTACTTGGCTTCAATGGTGAGCATGCGCAAGCGCTGACACCGCTCTACCTGCTTGGCTCCGGATACA
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| Amino Acid Sequence |
>amino acid permease
MAHLKRTLSLGAVTLFGIAYMTPIIVLGTFGILADTTQGAVPSAYLAASIAMLFTALSYGKMAKAFPVAGSAYTYVRKSISPKLGFLAGWAVLLDYLFLP MAIWLIGAAYLHSAFPAVPHPVWVLAFIAVTTAINIIGLQLAKTVNGVLMLLQFLVLAAFVGLAVHYATGELNQPLWSLAPFHQDGFQLPLIMSGAAIAC YSFLGFDAVSTLTEETHEPRKTIPRAILLITLLGGFIFIVASYFVQLAHPSATFSNPDSAAYEIAKAIGGDIFVSFFLIGLIVGQFTSGLSAQASASRLL FAMGRDGVLPKRWFGRLSTRFGTPVISIVLCGVVALLALRMDVTTSTSFINFGAFLAFSLVNLSVIFHYWIAQGERGLKAAAVYLAFPLVGLMADLWLMA SLDPMAIYLGVAWLGMGCLYLLVITRGLRQQPPEMHFEEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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