Pseudomonas sp. LAIL14HWK12:I6, D907_RS0110595
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I6 D907DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGCGATGTGCTGGCCAAGCGTATCAGTGGTGGTGAGGAGAAAATCTTGCCGACCCACATCGAGCGCGTGGCCGAAGCCCAGCGCCGCCTGGCGGCAGA GGCCGACGAGGAGCTGGCCCGCCTGGTGGCACTGCAAGCGGTCAACCCGAGTGTGCGTGACAGCGAAATCAACGCCCTGCGCAAGCAGCGTGAAGATGGC CTGGCAATGCTGGAAAAGGCCGCCCTGCGCCTGGAAGCCATTCGCGTGCTGGTGGCGGGCTAAATACCGGAGCTATGGGGCCGCTTTGCGGCCCCATAGC CGGCACAGCAGCCCTGATCTCACGAGCCTCTATTACGGTCCAAACTCTTTATTCCTGGCCGCAATCACGCTGATTACCAAATCGTAGGAATCAATGTGCC ATTAGTCAGGAAGGCTTAAATACTCCTTCCTATACTGCCTCTGGACAGTCTGCACAGGGTTGTAGCGCAGACGAGTGAAAACTCGATCAAGAGGCATTCC
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| DNA Sequence for Gene |
>D907_RS0110595
ATGGAGTGGCTAGGGCTGCAACTGTTCGCCGACTTGCCGGCAACCGGGCGTATCGTCATTGATTGCCGTCATGAACCGTTTCTGGTTCTGCTCGCCTACT TCGTTGCCTGCGCAGCCTGCTTCGCCACGCTCGACATGGCCGAGCGACAATCCCACAGCCCCGAACCCACTGCCCACCGCCAATGGAACATGCTCGGCGC TTGCTGCCTGGCCGGTGGCATCTGGGCCATGCACTTCATCAGCATGCTGGCCTTCCAGGCACCGGTGGAAGTGCACTACGACGTTTCCCTGACCATTCTT TCGCTGCTCATCGCCCTGGGCGTAGCCTGGCTGGCCATGTACAGCCTGGAACGCACACAAATGCGCATGCATCATTTTGTGCAAAGCGCAGTGTTGATTG GCCTGGGCATCATCCTCATGCACTTTGTCGGCATGGCCGCCTTGGAAACCGGCGCCGTGCAGTATTACCAGACCGGCCTGCTGCTGGCCTCTGGCGCCAT TGCCCTGCTCACCAGCCTGGCCGCGTTGTGCCTGGCCCGCTACTTCCGTAATGGCAGTGGCACTCTTTATCAGGCCATGAAGTACGGCGCCAGCCTGCTG ATGGCTGCCGGTATCGTCGCTACCCATTTCACCGCGATGTCGGCCATGACGCTGGTCATCCCGGCCGATACCGCCCTGCGCCTGCCTTCTGGCGACAACA GCCTGCAACTTGGGCTGGGCATCGGCTTCATCACACTGCTCATCAGCGGTGCCAGTATCAGTGCCGCATTGGCCGACAAAAAGTTGCAGAGTAAAGAGCA TGACTTGCGCCGGGTCAGCGTGCTACTCAGCCAGCTGGACCAGGCCCGCGCCTCGCTGCAACAAGCGGCGCATTACGACGCGCTCACCAATCTGGTCAAC CGCCGTGGCTTCAACCAGGTGTTCGCCGAGCGGCTGGCCGAACACCAGGCCAGTGAAAGCCGTCTGGCGGTGATGTTCCTCGACATCGACCATTTCAAGC GCATCAACGACAGCCTCGGCCATGACGCCGGTGACGAGCTGCTCAAGGTGATCGCCAACCACATCAAGGCCGCCACCCGCAGCCAGGACCTGGTCGCGCG CTTCGGGGGCGACGAGTTCTGCATCGTGACCAGCCTGAATAACCGCGACGAAGCCCGACATCTGGCCCAGCGCATCATGCAACGAATGAAAGAGCCCATC GACCTGGGTGGACGGCGCATGGTCATGACCACCAGCATCGGCATCAGCATCTTCCCTGACGACGGCACCAGCGTCGAAGAGCTGCTCAAACATGCCGACC TGGCCCTGTATCAGTCAAAGGACAACGGGCGCAACAGCCTGAACTTCTTCAACGACAACTTGAAGACCCAGGCCACGATGGCATTGCAACTGGAAGAAGA ACTGCGCATGGCACTGCTCGAAGAACGCGGGCTCTGCGTCCATTACCAGCCCATCTTCGATATGCGCAGCGGGCAGCTGGCCAAGCTGGAAGCCTTGGTG CGCTGGCAGCACCCGCAACATGGCCTGCTCGGCCCCGAACGCTTTATCGGCATTGCCGAAGCCAACGGCCTGATCATCGACCTCGACCTGTGGGTACTGC GCCACGCCTGCAACGATCTGGCCCACCTGCAGCGCTATGGCTACGGCGACTTCAAGGTCACGGTCAACTGCTCGGCGGTTACCCTCAGCCATGACGAGCT ACCCAACGAAGTGGAGAAAGCACTGTTTCACGCCGGGCTCTGCGCCCGGCAACTTGAGCTGGAAGTGACCGAAAACGCCCTCATGGGGGATCTCCAGCGC ACGGTGAACCTGCTCAAGCGCGTTCGCGCCCTGGGTGTGGCGCTGTCGATCGACGACTTCGGCACCGGTTACTCGTCTCTGGCCTACCTCAAACGCCTGC CGCTGGATGTACTGAAGATCGACCGCACGTTCCTGCAGGATGTACCGGGTAGCCAAAAGGATCGGGAAATCGTCCAGGCGATCATCGTCATGGCACACAC GCTGCACTTGCAGGTGGTCAGTGAGGGCGTAGAGACTACGGAACAACAGGCGTTCCTCAAAACCCACGGCTGCGACTATCTCCAGGGTTACCTGCTGGGT CGCCCGGTACCACTGGCCGAGCTGCGACCACTGCTGGAGCGGTTGCAGCATCAGGACGGCGTGCTCAACCCTTGTTACGGTAAAGTTCTACCAGGGTCGC CGGATCTTTTTGCAGGTAACCCTGGCTACCGTGCAGGCGCATCAATTGCGCGGCGAGGCCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCGTCGCCGAACCCTGCTCGCGGGAGAATTTGACCGCGCCATCAAGGTCCTTGAGTAGCGTGCGCACATGCCACTTGATCGGTTCGAAGCGGCTTTC GGCCATTTGCGGCGCCAGGATCTGCAGGGGCTTGGAGTCGGCAAAGCCACCGGCCAAGGCTTCGGCGATCAACGTCGCATCCACCCCGGACTGCTCGGCC AACGCCACGACTTCGGCAATGACCAAGGCGTTGCATGCCACGATCATCTGGTTACAGGCCTTGGTCACCTGGCCTGCGCCCACCGCCCCCATATGCGTCA CCCGCTGGCCAAGTACCTGCAGCACCGGCCGGGCACGCTCAAGGTCAACCGCCTCGCCACCGACCATGATCGCCAGGGTACCGGCTTCGGCACCGGGCGT GCCGCCGGACACCGGGGCATCCAGCCAGGCCATGCCACACAGTGCGGCCAGTTCGGCAGCCATTTCACGGGTGGCGGTGGGCTCCAGGCTGGAGAAATCG
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| Amino Acid Sequence |
>diguanylate phosphodiesterase
MEWLGLQLFADLPATGRIVIDCRHEPFLVLLAYFVACAACFATLDMAERQSHSPEPTAHRQWNMLGACCLAGGIWAMHFISMLAFQAPVEVHYDVSLTIL SLLIALGVAWLAMYSLERTQMRMHHFVQSAVLIGLGIILMHFVGMAALETGAVQYYQTGLLLASGAIALLTSLAALCLARYFRNGSGTLYQAMKYGASLL MAAGIVATHFTAMSAMTLVIPADTALRLPSGDNSLQLGLGIGFITLLISGASISAALADKKLQSKEHDLRRVSVLLSQLDQARASLQQAAHYDALTNLVN RRGFNQVFAERLAEHQASESRLAVMFLDIDHFKRINDSLGHDAGDELLKVIANHIKAATRSQDLVARFGGDEFCIVTSLNNRDEARHLAQRIMQRMKEPI DLGGRRMVMTTSIGISIFPDDGTSVEELLKHADLALYQSKDNGRNSLNFFNDNLKTQATMALQLEEELRMALLEERGLCVHYQPIFDMRSGQLAKLEALV RWQHPQHGLLGPERFIGIAEANGLIIDLDLWVLRHACNDLAHLQRYGYGDFKVTVNCSAVTLSHDELPNEVEKALFHAGLCARQLELEVTENALMGDLQR TVNLLKRVRALGVALSIDDFGTGYSSLAYLKRLPLDVLKIDRTFLQDVPGSQKDREIVQAIIVMAHTLHLQVVSEGVETTEQQAFLKTHGCDYLQGYLLG RPVPLAELRPLLERLQHQDGVLNPCYGKVLPGSPDLFAGNPGYRAGASIARRGH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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