Pseudomonas sp. LAIL14HWK12:I6, D907_RS0110595

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00052 duf2_2 IPR001633 EAL domain 460 707 7.6E-109
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 286 448 2.3E-47
CDD cd01949 GGDEF IPR000160 GGDEF domain 291 445 2.7811E-65
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 290 445 4.1E-51
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 461 723 1.5E-95
CDD cd01948 EAL IPR001633 EAL domain 466 707 2.74806E-106
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 279 452 8.5E-59
Pfam PF03707 Bacterial signalling protein N terminal repeat IPR005330 MHYT domain 73 118 6.0E-14
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 285 451 5.9E-47
Pfam PF03707 Bacterial signalling protein N terminal repeat IPR005330 MHYT domain 134 186 3.4E-10
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 295 452 6.12E-52
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 472 716 8.5E-86
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 461 717 6.4E-88
Pfam PF00563 EAL domain IPR001633 EAL domain 466 702 2.8E-73
SMART SM00267 duf1_3 IPR000160 GGDEF domain 279 450 7.2E-68
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 269 717 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.