Pseudomonas sp. LAMO17WK12:I2, D883_RS0117235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47226
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 750 838 9.9E-11
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 616 737 3.27E-24
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1821 1932 1.4373E-31
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1515 1656 2.4E-21
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1187 1315 1.3E-31
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1186 1283 2.2E-6
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 617 742 8.7E-24
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 617 710 1.9E-4
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1186 1284 9.73804E-14
SMART SM00260 chew_2 IPR002545 CheW-like domain 1648 1792 5.8E-27
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1047 1175 1.2E-25
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1819 1932 3.9E-35
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1469 1655 2.1E-50
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1818 1937 6.83E-37
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1047 1145 3.20855E-11
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1616 1634 1.2E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 743 872 1.3E-17
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1188 1282 2.9E-15
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1472 1653 3.01E-35
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 619 740 0.0
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 619 706 1.2E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 888 1010 4.41E-14
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 750 806 1.2638E-5
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1655 1788 4.19E-23
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 431 555 2.65E-13
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 650 700 1.00046E-4
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 747 869 2.36E-18
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 747 843 0.015
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1729 1790 2.5E-19
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 15 129 6.9E-7
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1661 1793 1.1E-19
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1560 1574 1.2E-9
Coils Coil Coil - - 1362 1389 -
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1047 1144 0.019
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 98 2.7E-7
MobiDBLite mobidb-lite consensus disorder prediction - - 587 607 -
Gene3D G3DSA:3.40.50.2300 - - - 1821 1940 5.9E-40
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1519 1655 3.0E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1186 1307 1.57E-28
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1046 1169 3.79E-26
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 129 3.93E-17
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1049 1148 5.7E-12
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1331 1470 1.8E-11
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1471 1655 2.6E-59
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1821 1932 1.3E-26
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 889 1017 7.3E-12
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1640 1653 1.2E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.