Pseudomonas sp. URMO17WK12:I12, D882_RS0105760

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATCGTGCGCGGCAGCAGTGGCGTTTCCGGCCAGTGGTTGCTGGGGTATCAGGGCTTCCTGGCGCAACTCGGTACGGCCATCGATCAGCAGCGGCAGAGC CTGAACTGGCACCAAAACAACCTGAACAAGGCGCGCGATACCTGGCAGCAGGCGTTTGCCCGTGTCGAAGGCCTGCGAAAACTTGTACAGCGCTACATGG ACGAGGCACGGCAGCTGGAAGACAAGCGCGAGCAGAAATTGCTCGATGAGTTGTCGCAGCGCTTGCCCAGACAGGATCCGTATTGAATCAGTGGTTCCGT GTCATCGTTCTTCACGGGCAAGCCACGCTCCCACAGGTCTTGTGTTGATCGTATTTGCTTTGCACGACACGAATCCTGTGCGAGCGAGGCTTGCCCGCGA AGGCGTACTCGAAGACACTGCAAACTATCAATCTTGCTCCCCTTCCAACCAAGTGCTAAACCTTGTACAGCACGTTAGCCAATGACAGGGAAGCCGTTAA
DNA Sequence for Gene
>D882_RS0105760
ATGTCAGTCAATGCAGAAGTCTCCCAGGATGGGAAAAAGCTCACGATTTCGATCAAGGGGCGATTCGATTTCGCCAAGCACCAGGAATTTCGTGAGTCGT ACGAGCGTCACAATGGCGGAAAAATGCCGAATTCGGTCGTGGTTGACTTAAAAGAAGCGACCTACCTCGACAGCTCCGCGCTGGGCATGTTGCTACTGTT GCGGGATCACGCCGGGGGTGACAACTCCGACATTCGCGTGGTCAACAGCAATTCGGACGTGAGAAAGATCCTCGCCATCTCCAATTTCGACAAGCTGTTC AACGTCACTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGCCATGCAGTCGCTCGAACCCCTGACGATCCTCATCGCCGAAGACAGCGCGGCCGATCGCATGCTGCTGTCGAGCATTGTCCGCCGCCAGGGCCATAA CGTGCTGACGGCCGCCAATGGTGCCGAGGCGGTCGAAACGTTTCGTCAGCAGCAACCGCACCTGGTGTTGATGGACGCGATGATGCCGGTGATGGACGGT TTCGAGGCGGCACGGCAAATCAAGCTGCTCGCCGGGGAAACCCTGGTGCCGATCATCTTCCTGACCTCGCTCACCGAAAGCGAAGCCCTGGCCCGATGCC TGGAGGCTGGCGGCGACGACTTTCTGGCAAAGCCTTATAACCCAGTGATCCTCGCCGCCAAGATCAAGGCGATGGATCGCTTGCGTCGCTTGCAGGCCAC GGTGTTGCAGCAGCGCGACCTGATCGGCAGGCATCATGACTATTTGCTCAATGAGCAGCGGGTGGCCAAGGCGGTTTTCGACAAGGTCGCGCATTCCGGC
Amino Acid Sequence
>anti-anti-sigma factor
MSVNAEVSQDGKKLTISIKGRFDFAKHQEFRESYERHNGGKMPNSVVVDLKEATYLDSSALGMLLLLRDHAGGDNSDIRVVNSNSDVRKILAISNFDKLF NVT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site