Pseudomonas sp. URMO17WK12:I12, D882_RS0105760
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0043856 | anti-sigma factor antagonist activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00377
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00377
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR33495 | ANTI-SIGMA FACTOR ANTAGONIST TM_1081-RELATED-RELATED | - | - | 3 | 102 | 6.4E-13 |
| Gene3D | G3DSA:3.30.750.24 | STAS domain | IPR036513 | STAS domain superfamily | 2 | 103 | 2.2E-20 |
| Pfam | PF13466 | STAS domain | IPR002645 | STAS domain | 16 | 97 | 5.4E-12 |
| CDD | cd07043 | STAS_anti-anti-sigma_factors | - | - | 6 | 102 | 1.82589E-20 |
| NCBIfam | TIGR00377 | JCVI: anti-sigma factor antagonist | IPR003658 | Anti-sigma factor antagonist | 1 | 102 | 5.4E-15 |
| SUPERFAMILY | SSF52091 | SpoIIaa-like | IPR036513 | STAS domain superfamily | 4 | 102 | 4.71E-21 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.