This is a list of Pseudomonas strains for which annotations and sequences can be found in the Pseudomonas Genome Database. For a more comprehensive list of ongoing genome sequencing, transcriptome and epigenomic projects based on what are registered in the NCBI BioProject database, please check out our searchable, user-friendly listing of BioProjects.

By default, strains having completely sequenced genomes and draft genomes are shown, however you can filter the list by using the wide range of criteria below. We plan to expand the search functionality as the number of genomes sequenced grows and metadata standards mature.

Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

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14230 strains returned

= Popular strains (Ordered by popular strains first, then by strain name, ascending)
Strain Assembly Contigs Assembly Level Genes (partial) BioSample Accession Host Organism Host Disease Isolation Source Location MLST Institution
Pseudomonas aeruginosa 2353 GCF_002194075.1
latest
118 Contig 6388 (136) SAMN07185685 human not collected blood USA 348 (paeruginosa) JCVI
Strain Details
Pseudomonas aeruginosa 2357 GCF_002193975.1
latest
93 Contig 6279 (123) SAMN07185680 human not collected nasopharynx USA 235 (paeruginosa) JCVI
Strain Details
Pseudomonas aeruginosa 235M0162 GCF_020640735.1
latest
- Scaffold 6367 (203) SAMN22048348 bacteremia blood unknown 111 (paeruginosa) OHSU
Strain Details
Pseudomonas aeruginosa 236 GCF_016836565.1
latest
- Scaffold 6391 (154) SAMN17723437 Congenital acyanotic heart disease India: Puttaparthi, CTVS ICU 1203 (paeruginosa) Sri Sathya Sai Institute of Higher Learning
Strain Details
Pseudomonas aeruginosa 237 GCF_016836545.1
latest
- Scaffold 6390 (161) SAMN17723438 Congenital acyanotic heart disease India: Puttaparthi, CTVS ICU 1203 (paeruginosa) Sri Sathya Sai Institute of Higher Learning
Strain Details
Pseudomonas aeruginosa 239 GCF_016836505.1
latest
- Scaffold 6473 (163) SAMN17723439 Renal calculi India: Puttaparthi, Urology Ward 654 (paeruginosa) Sri Sathya Sai Institute of Higher Learning
Strain Details
Pseudomonas aeruginosa 239/1 GCF_022552175.1
latest
- Scaffold 5859 (112) SAMN23763320 Russia: Samara 242 (paeruginosa) Pirogov Russian National Research Medical University
Strain Details
Pseudomonas aeruginosa 239A, isolate 13121-1 GCF_003698565.1
latest
- Contig 6698 (199) SAMN05226626 human acute infection patient with acute infection France University Laval
Strain Details
Pseudomonas aeruginosa 241 GCF_016836525.1
latest
- Scaffold 5855 (129) SAMN17723440 Congenital acyanotic heart disease India: Puttaparthi, CTVS ICU 639 (paeruginosa) Sri Sathya Sai Institute of Higher Learning
Strain Details
Pseudomonas aeruginosa 243931 GCF_007559125.1
latest
- Complete Genome 6049 (38) SAMN12306121 urinary tract infection sputum specimen China: Zhejiang 235 (paeruginosa) Beijing Institute of Microbiology and Epidemiology
Strain Details
Pseudomonas aeruginosa 248/3 GCF_022552215.1
latest
- Scaffold 5863 (86) SAMN23763321 Russia: Samara 231 (paeruginosa) Pirogov Russian National Research Medical University
Strain Details
Pseudomonas aeruginosa 24Pae112 GCF_003433235.1
latest
- Complete Genome 6677 (71) SAMN07958398 Sepsis blood Colombia 235 (paeruginosa) El Bosque University
Strain Details
Pseudomonas aeruginosa 25 GCF_004351755.1
latest
- Scaffold 6326 (1553) SAMN10743678 infection hospital Italy: Trento 235 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 250/1 GCF_022552155.1
latest
- Scaffold 5919 (205) SAMN23763322 Russia: Samara 882 (paeruginosa) Pirogov Russian National Research Medical University
Strain Details
Pseudomonas aeruginosa 251 GCF_016836485.1
latest
- Scaffold 6481 (163) SAMN17723441 Retroperitoneal fistula India: Puttaparthi, Urology Ward 654 (paeruginosa) Sri Sathya Sai Institute of Higher Learning
Strain Details
Pseudomonas aeruginosa 2543_S1 GCF_021060745.1
latest
- Contig 6072 (281) SAMN20752077 Spain 3080 (paeruginosa) Instituto de Investigacion Sanitaria y Biomedica de Alicante
Strain Details
Pseudomonas aeruginosa 255 GCF_016836465.1
latest
- Scaffold 6420 (169) SAMN17723442 Vesicoureteral reflux India: Puttaparthi, Urology Ward 654 (paeruginosa) Sri Sathya Sai Institute of Higher Learning
Strain Details
Pseudomonas aeruginosa 2570 GCF_002193755.1
latest
101 Contig 6421 (137) SAMN07185696 human not collected blood USA 389 (paeruginosa) JCVI
Strain Details
Pseudomonas aeruginosa 2596 GCF_009650455.1
latest
- Contig 6198 (160) SAMN12636343 Cystic fibrosis sputum France: Lyon 253 (paeruginosa) CIRI
Strain Details
Pseudomonas aeruginosa 259S240811BSL_PA1 GCF_004374515.1
latest
- Contig 6296 (77) SAMN10478163 human cystic fibrosis sputum Canada: Montreal 17 (paeruginosa) University Laval
Strain Details