Pseudomonas aeruginosa 243931

Strain Overview
Organism Name Pseudomonas aeruginosa 243931
Species Pseudomonas aeruginosa
Strain 243931
Description/Title
Annotated Genes 6049
Partial Genes 38
Host Information
Host Species Disease urinary tract infection
Geographic Location
Location Name China: Zhejiang
Isolation Source sputum specimen
Latitude/Longitude 28 N 121 E
Sample Provider
Name Xiaoyuan Jiang
E-mail m18911613750@163.com
Institution Beijing Institute of Microbiology and Epidemiology
Date Collected 2016

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa 235
aroE
11		 trpE
4		 nuoD
1		 guaA
3		 acsA
38		 mutL
13		 ppsA
2
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
GCF_007559125.1
Assembly Status latest
Scaffolds 1
Contigs
Contig N50 6514208
Assembly Level Complete Genome
Percent GC
Cross-References
NCBI BioSample Accession SAMN12306121
NCBI Taxonomy ID 287
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information
Details
Genome Browsers*
Pseudomonas aeruginosa strain 243931 chromosome, complete genome

Annotated Features

Feature Count
gene 6049
CDS 5982
pseudo 116
tRNA 63
rRNA 12
ncRNA 3
tmRNA 1

Replicons

Name Length GC
Pseudomonas aeruginosa strain 243931 chromosome, complete genome 6514208 bp 66.3%
Replicon details

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF