This is a list of Pseudomonas strains for which annotations and sequences can be found in the Pseudomonas Genome Database. For a more comprehensive list of ongoing genome sequencing, transcriptome and epigenomic projects based on what are registered in the NCBI BioProject database, please check out our searchable, user-friendly listing of BioProjects.

By default, strains having completely sequenced genomes and draft genomes are shown, however you can filter the list by using the wide range of criteria below. We plan to expand the search functionality as the number of genomes sequenced grows and metadata standards mature.

Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).

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14230 strains returned

= Popular strains (Ordered by popular strains first, then by strain name, ascending)
Strain Assembly Contigs Assembly Level Genes (partial) BioSample Accession Host Organism Host Disease Isolation Source Location MLST Institution
Pseudomonas aeruginosa 157 GCF_004349995.1
latest
- Contig 6620 (140) SAMN10743800 infection hospital Italy: Trento 395 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 1578_S13 GCF_021061335.1
latest
- Contig 6675 (278) SAMN20752056 pneumonia Spain Instituto de Investigacion Sanitaria y Biomedica de Alicante
Strain Details
Pseudomonas aeruginosa 158 GCF_004349975.1
latest
- Contig 6529 (386) SAMN10743801 infection hospital Italy: Trento 235 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 158/4 GCF_022552455.1
latest
- Scaffold 6207 (134) SAMN23763307 Russia: Samara 2465 (paeruginosa) Pirogov Russian National Research Medical University
Strain Details
Pseudomonas aeruginosa 159 GCF_004349985.1
latest
- Scaffold 6780 (437) SAMN10743802 infection hospital Italy: Trento 446 (paeruginosa) University of Trento
Strain Details
Pseudomonas aeruginosa 159-2 GCF_030326425.1
latest
- Scaffold 6671 (226) SAMN15324862 intestine China 313 (paeruginosa) City University of Hong Kong
Strain Details
Pseudomonas aeruginosa 159/5 GCF_022552415.1
latest
- Scaffold 5880 (118) SAMN23763308 Russia: Samara 708 (paeruginosa) Pirogov Russian National Research Medical University
Strain Details
Pseudomonas aeruginosa 1590 GCF_003863645.1
latest
- Contig 6159 (157) SAMN10484666 human cystic fibrosis cystic fibrosis patient United Kingdom: Scotland, Queen Elizabeth University Hospital Glasgow 699 (paeruginosa) University of Aberdeen
Strain Details
Pseudomonas aeruginosa 15958 GCF_017288095.1
latest
- Scaffold 5792 (185) SAMN17860404 sputum Nigeria 2935 (paeruginosa) Cepheid
Strain Details
Pseudomonas aeruginosa 15964 GCF_017838075.1
latest
- Contig 6547 (196) SAMN17860409 wound Nigeria 1203 (paeruginosa) Cepheid
Strain Details
Pseudomonas aeruginosa 15965 GCF_017292115.1
latest
- Contig 6139 (185) SAMN17860410 urine Nigeria 773 (paeruginosa) Cepheid
Strain Details
Pseudomonas aeruginosa 15966 GCF_017838135.1
latest
- Contig 6525 (197) SAMN17860411 urine Nigeria 1203 (paeruginosa) Cepheid
Strain Details
Pseudomonas aeruginosa 15986 GCF_017582685.1
latest
- Contig 6540 (246) SAMN17860427 wound Nigeria 654 (paeruginosa) Cepheid
Strain Details
Pseudomonas aeruginosa 159M0046 GCF_020640765.1
latest
- Contig 6335 (718) SAMN22048414 bacteremia blood unknown 235 (paeruginosa) OHSU
Strain Details
Pseudomonas aeruginosa 15_0495 GCF_028435825.1
latest
- Contig 5618 (115) SAMN18869630 Cystic Fibrosis sputum Spain: Santander ITACYL
Strain Details
Pseudomonas aeruginosa 15_4983 GCF_028435785.1
latest
- Contig 5714 (188) SAMN18869637 Cystic Fibrosis sputum Spain: Santander 569 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 15_6548 GCF_028435815.1
latest
- Contig 5905 (182) SAMN18869633 Cystic Fibrosis sputum Spain: Santander 379 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 15_7690 GCF_028435945.1
latest
- Contig 5871 (146) SAMN18869632 Cystic Fibrosis sputum Spain: Santander 379 (paeruginosa) ITACYL
Strain Details
Pseudomonas aeruginosa 16 GCF_004370025.1
latest
- Contig 5928 (87) SAMN10478405 human cystic fibrosis sputum Canada: Chicoutimi University Laval
Strain Details
Pseudomonas aeruginosa 160 - Assembly GCF_004349955.1 GCF_004349955.1
latest
- Contig 6702 (213) SAMN10743803 infection hospital Italy: Trento 175 (paeruginosa) University of Trento
Strain Details