Pseudomonas aeruginosa 158/4

Strain Overview
Organism Name Pseudomonas aeruginosa 158/4
Species Pseudomonas aeruginosa
Strain 158/4
Description/Title
Annotated Genes 6207
Partial Genes 134
Host Information
Geographic Location
Location Name Russia: Samara
Sample Provider
Name Yuliya Bocharova
E-mail ivrin7@gmail.com
Institution Pirogov Russian National Research Medical University
Date Collected 2020-01-23

MLST Data

Database Scheme Sequence Type Alleles
PubMLST paeruginosa 2465
acsA
17
nuoD
4
guaA
11
trpE
2
aroE
5
ppsA
29
mutL
5
Strains have MLST sequence types assigned when available. They are currently based on schemes at the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) that were predicted by the "mlst" software developed by Torsten Seemann (Github https://github.com/tseemann/mlst).
Assembly
Assembly DB
RefSeq
Assembly Accession
Assembly Status latest
Scaffolds 74
Contigs
Contig N50 346201
Assembly Level Scaffold
Percent GC
Cross-References
NCBI BioSample Accession SAMN23763307
NCBI Taxonomy ID 287
NCBI Bioprojects
Related Data
Additional Genome Project Info
Sequencing Information
Genome Assembly Information

Annotated Features

Feature Count
gene 6207
CDS 6143
pseudo 95
tRNA 55
rRNA 9
ncRNA 3
tmRNA 1

Replicons

74 replicons associated with this assembly

Download Sequences

Genomic ORF DNA Intergenic Amino Acid

Download Gene Annotations

TSV CSV GBK EMBL GFF3 GFF3 + sequence GTF