Pseudomonas sp. 45MFCol3.1, G368_RS0125625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. 45MFCol3.1
GCF_000382025.1|latest |
| Locus Tag |
G368_RS0125625
|
| Name |
|
| Replicon | scaffold00009.9 |
| Genomic location | 183827 - 186700 (+ strand) |
Cross-References
| RefSeq | WP_019651288.1 |
| GI | 518481081 |
| NCBI Locus Tag | G368_RS0125625 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
diguanylate cyclase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -7.89 |
| Kyte-Doolittle Hydrophobicity Value | -0.141 |
| Molecular Weight (kDa) | 107.8 |
| Isoelectric Point (pI) | 6.46 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004258 (973 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: G368_RS0125625
Search term: diguanylate cyclase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
phosphodiesterase 8B [Source:HGNC Symbol;Acc:HGNC:8794]
E-value:
7.2e-07
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
phosphodiesterase 8B [Source:HGNC Symbol;Acc:HGNC:8794]
E-value:
7.2e-07
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
phosphodiesterase 8B [Source:NCBI gene (formerly Entrezgene);Acc:8622]
E-value:
7.2e-07
Percent Identity:
30.1
|
|
Ensembl
110, assembly
GRCh38.p14
|
phosphodiesterase 8B [Source:HGNC Symbol;Acc:HGNC:8794]
E-value:
7.2e-07
Percent Identity:
30.1
|
References
No references are associated with this feature.